| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3830 |
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| Symbol | |
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| ID | 4924237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4560988 |
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| End bp | 4561722 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640165459 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001095955 |
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| Protein GI | 127514758 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000883771 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGGGAGG CTTATGAAGC CAGCAATGGG TCAGCGGGTG CCAGAACCCT GACTGATATG
GTAACGACTG CTGGCGTGAG GTTGACGCGC TATCGTGCCA CAGGGCTGAT GAAGAAGCTG
GGGCTAGTGA GCTGCCAGGT GCCGCAACAT CGCTACAAAA AGGCAGACAA GGAGCATGTC
GCCATCCCTA ACCTCCTTGA CCGCCAGTTT GCTGTGACGG CTCCCAATCA AGTGTGGTGT
GGCGATGTGA CCTATGTGTG GACAGGCAAA CGATGGGCTT ACCTTGCCGT TGTTCTGGAC
TTGTTTGCAC GGAAACCGGT GGGGTGGGCG ATGTCATTTT CGCCCGATAG TGCGCTAACA
AGCAAGGCAC TAGCCATGGC CTTTGAGGCG CGAGGAAGGC CGAAAGACCT AATGTTCCAT
AGTGACCAAG GAAGCCACTA TACCAGCCGC CGCTTCCGCC AACAGCTCTG GCGTTATCAG
ATTAAGCAGA GCATGAGTCG ACGAGGAAAC TGCTGGGACA ACAGCCCGAT GGAGCGCTTC
TTTAGAAGCT TAAAAACAGA ATGGATACCG ATGACCGGCT ATCGGGATAT CGGTGAGGCT
AAGAGTGAAA TTTCGCGATA TGTGACGGGG TATTACAGTC AGCTAAGACC ACATCAATAT
AACGGTGGGC TGACACCCAA TGAGTCAGAG CGAAGATACT GGCTTGAATA CAAAACCGTG
GCCAATTTTA GTTGA
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| Protein sequence | MREAYEASNG SAGARTLTDM VTTAGVRLTR YRATGLMKKL GLVSCQVPQH RYKKADKEHV
AIPNLLDRQF AVTAPNQVWC GDVTYVWTGK RWAYLAVVLD LFARKPVGWA MSFSPDSALT
SKALAMAFEA RGRPKDLMFH SDQGSHYTSR RFRQQLWRYQ IKQSMSRRGN CWDNSPMERF
FRSLKTEWIP MTGYRDIGEA KSEISRYVTG YYSQLRPHQY NGGLTPNESE RRYWLEYKTV
ANFS
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