| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3825 |
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| Symbol | |
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| ID | 4922830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4554310 |
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| End bp | 4555854 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640165454 |
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| Product | transposition protein |
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| Protein accession | YP_001095950 |
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| Protein GI | 127514753 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.365927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00340048 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTTGGTT TTCCCGTTCC GTATCCAGAA GAGCTGATTT ATAGCGTCGT GGCAAGGGCG
AGAACTCATA GTGGCATTAC TTCACCCAAA CAACTCCTTG ATGAAATCTT CGAAAATCGA
AAGGTTACTG CTACCGTTGA TTTGCCAAGC CATTTAACTG CTATATCGAA TCAATACCCC
GAATCATTGA GCCTGACTGC ACATTCATTG ATGTATAACC ATACGCTGTT CCCTCTGTAT
GCGCCCTTCA TTGATGAACA ACGGCGCCAA AATTGTATGA ATTGGATGGC GTTGCAGTCC
AACGGCAGAG CTCATTTAGC GCTTGGAATA AACGCATCAG TTGTTAAAAG AAGCCAATTT
CTGCGTTATT GCCCTCAGTG TTTTAATGAG CAGGTACAGC GGCACGGAGA ACGGTTTTGG
GAGAGAATGT GGCAGCTCCC CTACGCTAAT TGGTGTGTCA AGCACAGTAC TCCATTGTAT
GCGTTTTCGA TAGTTCCTCA TCATGAACAC CGTCACTTGT TTTATGCTGC AGATGTGACT
ACTGAAGATA GGCTTTTAGG CGAGTATGAA ATTGAAAGCC TACGGATTGG CCAATTTGCG
ACTCAATTAA TGCAAATTAA GCCTCAAGAA TCTCCAACGT ATTTTCAATG GGACTGTTTT
TACCATGAGT TGCTTGTTGA TGCTGGTTGT AAGTATGGTA AGAAAGTTAA GCATGACGAG
GTGTTGCAGC GCATCAGGTC GTTATGGCGT GAAGAATGGT TGTCCTACGT CAAACTGACA
TTGACGCAAA GTGACACATG CTGGGCGAGA ACAATCTTAA GAAAACATCG TAAGTCCTTT
AGTTTCATTC AGCATTTCAT CATACAGAGT TGTTTACTGA GTAAAGACAT CCCTCTCTCA
GAAGTGTTGG AAAAAGTAAG ATCCTACCCT AAATATAAAA GAATATCTCA AGTTATTCAT
TATATAAATC AAAAAGATAA GTCAAATAGA GAAAGGTGGT TTTGGCTCCT GAAAGAACTG
GGTTGTAAAC AGGCTCGGTT ATGTGGTTCT CAGGATTTAT ACATGTGGTT ATACCGGCAC
GATTATGAAT GGTTGATGAG GATCAATAAA CGTTACCAGA GAACAATCAC TTATGAAGAT
AAGCGTGTAA ATTGGCAGCA AAGGGATAGA GCCTTGGTCA GAGGATTATT TCGACTGCTC
CACGGGTTCG ATGAGGTGCT TGATGCTCCT CGGCTATCGA GTACCTATCT ACTATCCCAA
TTAGGGCTTG GGACTTTGTC AGCGAAGCAA TACAGAAAAT TGCCTTTAAC GGCTGCGTTT
TTATCAAAGT ACTCAGAATC GATTTATCAG TATCAAATTC GCAGATTGAC CCGCCAGTAT
ATAGATTTGT TGCAGCGGCA TATCAAAATT GAAAGATGGA AATTACTTCG ATGTGCTGGA
CTTAGTGAAG AGCGTTTACA GCCTTTAACG CAGAGTTTTT TGTCAGGAAT ATTGGAAGGT
AAATGGACGA CTACAGATTT AAGCACATCC CCCAAGATGC CTTAG
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| Protein sequence | MLGFPVPYPE ELIYSVVARA RTHSGITSPK QLLDEIFENR KVTATVDLPS HLTAISNQYP
ESLSLTAHSL MYNHTLFPLY APFIDEQRRQ NCMNWMALQS NGRAHLALGI NASVVKRSQF
LRYCPQCFNE QVQRHGERFW ERMWQLPYAN WCVKHSTPLY AFSIVPHHEH RHLFYAADVT
TEDRLLGEYE IESLRIGQFA TQLMQIKPQE SPTYFQWDCF YHELLVDAGC KYGKKVKHDE
VLQRIRSLWR EEWLSYVKLT LTQSDTCWAR TILRKHRKSF SFIQHFIIQS CLLSKDIPLS
EVLEKVRSYP KYKRISQVIH YINQKDKSNR ERWFWLLKEL GCKQARLCGS QDLYMWLYRH
DYEWLMRINK RYQRTITYED KRVNWQQRDR ALVRGLFRLL HGFDEVLDAP RLSSTYLLSQ
LGLGTLSAKQ YRKLPLTAAF LSKYSESIYQ YQIRRLTRQY IDLLQRHIKI ERWKLLRCAG
LSEERLQPLT QSFLSGILEG KWTTTDLSTS PKMP
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