| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3822 |
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| Symbol | |
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| ID | 4922827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4551316 |
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| End bp | 4552284 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640165451 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001095947 |
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| Protein GI | 127514750 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0247422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAG CTGATTTGGT ACTTAATCTA GTTGAAACGG GTATTAAGGG AGATTTGCCT
CGTTTTAAGA AAACAGCAGA AGCTATTGCT GCTGAAGCCT CGGCTCGTCG TCAGTACCAT
TTGGCTGACA AGCTAAAAAA TATTCTTACG AGTACAGCCA CGGTTGAAGG TCGTCACTTC
ACATTTGATT CAAGCCTTCA AAATTCGTTC TATGAGATTC GGACGCAAAA AACGTTTGAT
GATCTTACTC TTCCGGAACA AGTTGTTTCT ACTTTTCAAG AAGTTGTTGA AGAGCATGCA
CGTAAAGATT TACTACGCTC ATACAATTTA GAGCCTCGAC ATAAGATTTT GTTGTCCGGA
CCACCAGGGA ACGGAAAAAC GACATTGGCA GAGGCTTTAG CTAATCATCT GTCAGTTCCC
TTTTTTACTG TTAAATATGA AGGGATTATT AATCGATTTC TTGGCGAAAC CGCGCAGCAA
ATCGACAAAT TGTTTGAGCA TATAAAAAAC CAACGATGTG TTCTTTTCTT TGATGAGTTT
GATGCTATCG GCAAGGAAAG AGAGGATGTA AATGACAATG GTGAGATGAA ACGGGTTGTT
AACTCACTTT TGAAACAGAT TGATCTATTA CCAAGTCATG TTGTGGTTAT TGGTGCTACG
AACCATGAAT CAATGCTCGA CAAGGCGATT TGGCGCAGAT TCCAAGTGCA AATTGAGGTC
CCTAGTCCTA CACAACGTAT GGCTACAAAA TGGTTTGAGG AATTTGAATG CCGTATTGGA
CATTCTTTAG GCCTTGCTCC CAGTACTATG GCTCGTCGAT TGATGGGCTT AAGTTTTGCT
GAGTTGGAAG AGTTTGCCTT GGATGTCCAA AGAAAATATG TACTTGGTTT GCCGGAAAGT
GAGAAGAACA TAAAGGCTAT TACTTCAAAT TGTCTCAATG TTTGGAGTAA GCGGGTAAAA
AATAAATAA
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| Protein sequence | MARADLVLNL VETGIKGDLP RFKKTAEAIA AEASARRQYH LADKLKNILT STATVEGRHF
TFDSSLQNSF YEIRTQKTFD DLTLPEQVVS TFQEVVEEHA RKDLLRSYNL EPRHKILLSG
PPGNGKTTLA EALANHLSVP FFTVKYEGII NRFLGETAQQ IDKLFEHIKN QRCVLFFDEF
DAIGKEREDV NDNGEMKRVV NSLLKQIDLL PSHVVVIGAT NHESMLDKAI WRRFQVQIEV
PSPTQRMATK WFEEFECRIG HSLGLAPSTM ARRLMGLSFA ELEEFALDVQ RKYVLGLPES
EKNIKAITSN CLNVWSKRVK NK
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