| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3814 |
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| Symbol | |
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| ID | 4922819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4542586 |
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| End bp | 4543488 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165443 |
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| Product | naphthoate synthase |
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| Protein accession | YP_001095939 |
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| Protein GI | 127514742 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
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| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.327755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0611627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA AGGTTTCCGA TATCTTTGAT CCCTCCTTAT GGGATCGAGT GTCAGGATTT
GATTTCGAAG ATATTACCTA CCATAGGGCG AAGGATCAGG GCACGGTACG TATCGCCATC
GATCGTCCAG ATTGCCTCAA CTCATTTCGC CCTAAGACGG TCGATGAACT CTATATCGCC
CTGGATCATG CCCGTCAATG GTCTGATGTA GGTTGTGTAC TCCTGACCGG CAATGGTCCA
TCGGCCAAGG GACAATGGTC TTTCAGTGCC GGTGGCGACC AGCGTATCCG CGGCAAGGAT
GGCTACAAGT ATGAAGGCGA AGAGACAGAT AAGCCCGACT TGGCGCGCAT GGGCCGCCTG
CATATCTTAG AGGTGCAGCG CCTGATCCGT TTCATGCCTA AGGTGGTAAT AGCGGTCGTG
CCGGGCTGGG CAGTAGGCGG CGGTCATAGC CTGCATGTGG TCTGCGATCT TACCCTGGCC
TCTAAAGAGC ATGCGGTATT TAAACAAACC GACCCGGATG TCGGCAGCTT CGACTCAGGG
TACGGCAGCG CCTACCTCGC CAAGATGATT GGCCAGAAGC GCGCCCGGGA AATTTTCTTC
CTCGGCTTTA ATTACAGCGC CGATGAGGCC TTCGATATGG GCATGGTCAA TCGCGCCATC
CCCCATGCAG AATTGGAAAC CGAGGCACTG AGATGGGCCA AAGAGATCAA CTCTAAGTCA
CCTACGGCTA TGCGTATGCT GAAGTATGGT TTCAACCTGC CAGACGATGG CTTAGTGGGT
CAGCAGCTGT TTGCCGGTGA GGCGACACGC CTGGCCTATG GTACCGACGA GGCGGTAGAA
GGACGAGATG CCTTCCTGGA AAAACGGGAT CAGGATTTCT CTAAGTTCCC TTGGCATTAC
TAG
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| Protein sequence | MTDKVSDIFD PSLWDRVSGF DFEDITYHRA KDQGTVRIAI DRPDCLNSFR PKTVDELYIA
LDHARQWSDV GCVLLTGNGP SAKGQWSFSA GGDQRIRGKD GYKYEGEETD KPDLARMGRL
HILEVQRLIR FMPKVVIAVV PGWAVGGGHS LHVVCDLTLA SKEHAVFKQT DPDVGSFDSG
YGSAYLAKMI GQKRAREIFF LGFNYSADEA FDMGMVNRAI PHAELETEAL RWAKEINSKS
PTAMRMLKYG FNLPDDGLVG QQLFAGEATR LAYGTDEAVE GRDAFLEKRD QDFSKFPWHY
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