| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3810 |
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| Symbol | |
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| ID | 4924164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4533634 |
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| End bp | 4534086 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640165436 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001095935 |
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| Protein GI | 127514738 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.209804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.479131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTTAA CTCGTTATAC AGATTTTGGT ATTCGTACGT TAATGTACCT GGCCTTATCG
CCAGAGAGAG AAACCCTGTT TAGAATCGCC GAGATCACCG AGGTGTTCGA TCTATCGGCT
AACCATGTGT CTAAGATAGT GCATCATCTT GGTAAAGAAG GTTATCTGCA GACGGTACGC
GGTAAGGCAG GTGGTTTTAA GCTAGGTAAG CCAGCGGATC AGATCAATAT CGGTGTCCTG
GTGCGCACGC TGGAAAATTC GCTGTCGCCA ATCGATTGCA GCAAGCCCTA TTGCCGTTTC
TCGCCAGCCT GTCAGCTCAA GGGCGTGCTC GCCGAGGCGG TAGACGCTTA TCTGGCCGTG
CTAGACAAAT ACTCATTGGC AGATGTCGTC AGTAATCGTG ACGAGTTAAG AGCCTTGCTA
CCGGATCTTA CCATCCCAGT CTTAGAGCTT TAA
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| Protein sequence | MQLTRYTDFG IRTLMYLALS PERETLFRIA EITEVFDLSA NHVSKIVHHL GKEGYLQTVR
GKAGGFKLGK PADQINIGVL VRTLENSLSP IDCSKPYCRF SPACQLKGVL AEAVDAYLAV
LDKYSLADVV SNRDELRALL PDLTIPVLEL
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