| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3795 |
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| Symbol | |
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| ID | 4924186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4514334 |
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| End bp | 4514756 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165421 |
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| Product | transmembrane pair domain-containing protein |
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| Protein accession | YP_001095920 |
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| Protein GI | 127514723 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4125] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACATA AGACGAGATT CGATCGCATC AGGTATCTAG TTGGGTTCGA GCTGGGGGCC
ATGGTGTTAG CCGTGCCCCT GGGCGCCTGG CTGACCTCGG TCGATTCTCG TGCCTTGTTG
GCCCTGGCCA TAGGCATGTC GCTGATTGCC GCGGCCTGGA ACTATGGCTA TAACCTGCTG
TTCGACAGAG CCATGCTCTA CTTCAAGTCG ACCATGGTGA AATCCATGGC AGACAGAGTC
TGGCACAGCC TGTTGTTTGA GTTGGGGCTG CTGTTTATCT CTGTGCCTAT CATGGCGGCC
TATCTGTCCA TCTCACTATG GCAGGCCTTC TGGCTGGATA TCGGCTTCGT GGTCTTCTAC
CTGGTTTTCA ACTACTGCTA CACCTACCTC TACGAGAAAT TTTTCTACGC GTCGCGGGGC
TAA
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| Protein sequence | MQHKTRFDRI RYLVGFELGA MVLAVPLGAW LTSVDSRALL ALAIGMSLIA AAWNYGYNLL
FDRAMLYFKS TMVKSMADRV WHSLLFELGL LFISVPIMAA YLSISLWQAF WLDIGFVVFY
LVFNYCYTYL YEKFFYASRG
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