| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3782 |
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| Symbol | |
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| ID | 4924202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4501477 |
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| End bp | 4502613 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165408 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001095907 |
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| Protein GI | 127514710 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGTT CAATCATTAC TATGGTCAGA AAAGAGCTGA CCGATGCCGC CAGGGACAAG
CGCTCTGTGA TGGCGGGCCT CTACTACGCC ATCGGCGCGC CGCTGATGAT GTGCGGCATG
TTTATGATCC TCATCGGCCA AATCACCAGC CCAGAGGCGC TTAACATCAC CATCACCCAC
GGCGAGCGCG CACCGGATCT AGTGAAGTAC CTCGCCAGCA ACGAGATAAG CCAGGGTGAT
GAGGCCGATC GCAAGGAGAT AGAACTTGTC ATCAGCCCAG ACTACGCCGC TAACATGGCC
AAGAGTCAGG CCGCCGAGAT AGTGCTGATC GCCGACAACT CCAACGAGAA GCTACAGTCT
TCTATCCGTC GGCTGGAGAA GGCGCTGCAG CAATACAGCG CCGAGATCGG CAGCCTGCGA
CTGATCGCCC GCGGCATAGA CCCTAAGGTG ATGCAGCCAA TCAAGGTCAA GGTGGAAGAT
CAGGCCACCT CAGACTCCAA GGGCGGGATG ATCTTAGGCG TCGCCATCTT CATGATGGTC
TATGCGGTGT TTATCTCCGG CATGAACCTG GCCATAGACA CCAGCGCCGG CGAGCGTGAA
CGCAACTCGC TGGCCCTGCT GCTCAGCCAT CCGGTATCGA CCCGGGATAT CGTACTGGCC
AAGGTGGCGG CGGTGACCAT CTTCGCCATG CTGGGGCTGA TCCTCACCCT GGTGATCTCT
AAGGTCGCCT ATGGCTTCGT GCCTTGGCAG GAGCTGGGCT TCTCGGTCAA CATCAATGTC
GACTTCATCC TCTTGATGTT GGCGATCGGC CTGCCCATCG CCCTGATGGC GGCGGCGCTG
CAGCTGTTCG TCTCCTTCAT GGCCAAGTCG TTCAAGGAGG CGCAGTCCTA CCTGACCATA
GTGCTGATCG TGCCCATGAT GCTGTCGATG GCGGCGAGCT ACAACATAGC GCCAGATACC
CTGCAGTGGC TGCCTATCTC GGGACAGATG CAGGCGCTGA TCGCCTTCAT CAAGGGCAAG
GAGATCCCCA TGATGCAGCT GGCGCTCTCC AGCGCCATCA CCTTCGTCAT CGCCCTGGCA
CTGGCCCTGG GCATGGAGCG CTCACTCAAG AGCGAGAAAA TCGTCTTCGG ACTCTAA
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| Protein sequence | MISSIITMVR KELTDAARDK RSVMAGLYYA IGAPLMMCGM FMILIGQITS PEALNITITH
GERAPDLVKY LASNEISQGD EADRKEIELV ISPDYAANMA KSQAAEIVLI ADNSNEKLQS
SIRRLEKALQ QYSAEIGSLR LIARGIDPKV MQPIKVKVED QATSDSKGGM ILGVAIFMMV
YAVFISGMNL AIDTSAGERE RNSLALLLSH PVSTRDIVLA KVAAVTIFAM LGLILTLVIS
KVAYGFVPWQ ELGFSVNINV DFILLMLAIG LPIALMAAAL QLFVSFMAKS FKEAQSYLTI
VLIVPMMLSM AASYNIAPDT LQWLPISGQM QALIAFIKGK EIPMMQLALS SAITFVIALA
LALGMERSLK SEKIVFGL
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