Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3775 |
Symbol | |
ID | 4924195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4494097 |
End bp | 4494501 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640165401 |
Product | thioesterase superfamily protein |
Protein accession | YP_001095900 |
Protein GI | 127514703 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.752542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTTAC GCTCTTTCAG TTTAACCATT CAACCCAGAT TCAATGAAAC CGATGGCCTG GGCCATATCA ACAATACCGT GATGCCCGTC TGGTTTGAGG CGGCGCGTGA GCCTATCTTC GCCATCTTCA ATCCCTCGCT CAATCTGGCC GAGTGGAACC TGATTGTGGC GGGCTTCACC ATCGCCTATA CCTCGCCGAC CCAGTATGGC CAGCCGGTGG AGATCAAGAC CTGGATCAGC CGTGTGGGCA ACGCCAGCTT CGAGGTGGCG CAGCAGAGCT GGCAGGGCGG CAAGATGACC GCCGAGGCCA AGACCACCTT AGTGCATTAC GACTACAGTA TCGACAAGAG CCGACCCATA GGGGAAGAGG TGAAGCAGGC GCTGCTGACC CTGACCGGCG AATAA
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Protein sequence | MPLRSFSLTI QPRFNETDGL GHINNTVMPV WFEAAREPIF AIFNPSLNLA EWNLIVAGFT IAYTSPTQYG QPVEIKTWIS RVGNASFEVA QQSWQGGKMT AEAKTTLVHY DYSIDKSRPI GEEVKQALLT LTGE
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