Gene Shew_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3775 
Symbol 
ID4924195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4494097 
End bp4494501 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content58% 
IMG OID640165401 
Productthioesterase superfamily protein 
Protein accessionYP_001095900 
Protein GI127514703 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.752542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTTAC GCTCTTTCAG TTTAACCATT CAACCCAGAT TCAATGAAAC CGATGGCCTG 
GGCCATATCA ACAATACCGT GATGCCCGTC TGGTTTGAGG CGGCGCGTGA GCCTATCTTC
GCCATCTTCA ATCCCTCGCT CAATCTGGCC GAGTGGAACC TGATTGTGGC GGGCTTCACC
ATCGCCTATA CCTCGCCGAC CCAGTATGGC CAGCCGGTGG AGATCAAGAC CTGGATCAGC
CGTGTGGGCA ACGCCAGCTT CGAGGTGGCG CAGCAGAGCT GGCAGGGCGG CAAGATGACC
GCCGAGGCCA AGACCACCTT AGTGCATTAC GACTACAGTA TCGACAAGAG CCGACCCATA
GGGGAAGAGG TGAAGCAGGC GCTGCTGACC CTGACCGGCG AATAA
 
Protein sequence
MPLRSFSLTI QPRFNETDGL GHINNTVMPV WFEAAREPIF AIFNPSLNLA EWNLIVAGFT 
IAYTSPTQYG QPVEIKTWIS RVGNASFEVA QQSWQGGKMT AEAKTTLVHY DYSIDKSRPI
GEEVKQALLT LTGE