Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3769 |
Symbol | |
ID | 4920761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4489146 |
End bp | 4490297 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640165395 |
Product | hypothetical protein |
Protein accession | YP_001095894 |
Protein GI | 127514697 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAAATA AATGGATTGC TGGTGTTATC TTACTGCTCG GCAGTAGCTT GAACCTGGTT CAGGCGGCGC CGACCAACCT TGAAACGCTG ATGGTTAAGG CGCCGGGTGT CGACAAGCCC ATGGCCTTCA AGGTTACTCT GCCCGCCAGT TATGGCGAGA ACCTAGATAA GCGCTATGTG CTGCTGTTCG ACTTCCATCC CCGCAGCCGC GGCTATCTCG AGGGGATGCA TGACTGGATG AGCCACAACG GCGACTGGCC CTGGCTGGAG ACCATAATCG TCACCGCGCC CGACGGTGAC CAGGCGCTGG GCAAGTTGAA GAGTCAGGCG ATAGAGCAGG AAGGCAGCGT CGCCCTGCTG GATTTCATGG GGCAGTCGCT GCTGCCCGCC ATCGACGCCA AATATCGCAC CAATGGCTTT CGCATCATGA ACGGCTTTAC CGGCAACGCC GGCCTGGTGC TCTACACCTT GCTCAATCGC CCCGAGTTGT TCAACGCCTA CCTGGCGGCG AGCCCTGTAC TGAGTGACGA CTTTGCCTAT GTGATCAAGT CGGCCGCCGA TAAGCTGGAG AAGCTCAAGG GCAAGCCACG CTACCTGATG CTGACTACCA GCGACAGCGA TTTCGAGCAG CGTCAGCTGG AGGATTTCGC GGCTTTAGAG GAGCTGCTCG AGACGACCAA TCATCCGGCG CTGCACTATA AGGTGAAGCG TTTCGACGGC ACCTACTATA TGACCCAGCC GATCCTGGCG ACCGCCTACG GCATAGAGTG GCTGTTCGAC GACTACCACA GGGTGCTCTC GCCAGACTCA GACATTGCCA AGGGCGGCGT GAAGGCGATT CTCGACCACT ATAGTTACCT GTCGCAGCAG AAGTATGGCT TCCCCGTGCC GTCCACCGAT TCGCTGATCG CCCTGGCGGA CGCCGAGTTT GCCAAGGATA AAGATAATGG GCTGGCTGTT TATCTGGCGG CGGTGGAGGC CAATCCTGAC TCCCACACCG CCCATGATGC CCTGGCAAGA GCCTATGGCG AGCTAAAGAT GTTTGACTTA GCCATAGCCC AGCAGAAGCA GGCGCTGGCC AAGACAGACC ATCCCTTCTG GACCCGTAAA TACAGCGAGA GCCTGGCGGC GCTAGAGGCG CAGCGGCACT AA
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Protein sequence | MINKWIAGVI LLLGSSLNLV QAAPTNLETL MVKAPGVDKP MAFKVTLPAS YGENLDKRYV LLFDFHPRSR GYLEGMHDWM SHNGDWPWLE TIIVTAPDGD QALGKLKSQA IEQEGSVALL DFMGQSLLPA IDAKYRTNGF RIMNGFTGNA GLVLYTLLNR PELFNAYLAA SPVLSDDFAY VIKSAADKLE KLKGKPRYLM LTTSDSDFEQ RQLEDFAALE ELLETTNHPA LHYKVKRFDG TYYMTQPILA TAYGIEWLFD DYHRVLSPDS DIAKGGVKAI LDHYSYLSQQ KYGFPVPSTD SLIALADAEF AKDKDNGLAV YLAAVEANPD SHTAHDALAR AYGELKMFDL AIAQQKQALA KTDHPFWTRK YSESLAALEA QRH
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