Gene Shew_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3769 
Symbol 
ID4920761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4489146 
End bp4490297 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content58% 
IMG OID640165395 
Producthypothetical protein 
Protein accessionYP_001095894 
Protein GI127514697 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAAATA AATGGATTGC TGGTGTTATC TTACTGCTCG GCAGTAGCTT GAACCTGGTT 
CAGGCGGCGC CGACCAACCT TGAAACGCTG ATGGTTAAGG CGCCGGGTGT CGACAAGCCC
ATGGCCTTCA AGGTTACTCT GCCCGCCAGT TATGGCGAGA ACCTAGATAA GCGCTATGTG
CTGCTGTTCG ACTTCCATCC CCGCAGCCGC GGCTATCTCG AGGGGATGCA TGACTGGATG
AGCCACAACG GCGACTGGCC CTGGCTGGAG ACCATAATCG TCACCGCGCC CGACGGTGAC
CAGGCGCTGG GCAAGTTGAA GAGTCAGGCG ATAGAGCAGG AAGGCAGCGT CGCCCTGCTG
GATTTCATGG GGCAGTCGCT GCTGCCCGCC ATCGACGCCA AATATCGCAC CAATGGCTTT
CGCATCATGA ACGGCTTTAC CGGCAACGCC GGCCTGGTGC TCTACACCTT GCTCAATCGC
CCCGAGTTGT TCAACGCCTA CCTGGCGGCG AGCCCTGTAC TGAGTGACGA CTTTGCCTAT
GTGATCAAGT CGGCCGCCGA TAAGCTGGAG AAGCTCAAGG GCAAGCCACG CTACCTGATG
CTGACTACCA GCGACAGCGA TTTCGAGCAG CGTCAGCTGG AGGATTTCGC GGCTTTAGAG
GAGCTGCTCG AGACGACCAA TCATCCGGCG CTGCACTATA AGGTGAAGCG TTTCGACGGC
ACCTACTATA TGACCCAGCC GATCCTGGCG ACCGCCTACG GCATAGAGTG GCTGTTCGAC
GACTACCACA GGGTGCTCTC GCCAGACTCA GACATTGCCA AGGGCGGCGT GAAGGCGATT
CTCGACCACT ATAGTTACCT GTCGCAGCAG AAGTATGGCT TCCCCGTGCC GTCCACCGAT
TCGCTGATCG CCCTGGCGGA CGCCGAGTTT GCCAAGGATA AAGATAATGG GCTGGCTGTT
TATCTGGCGG CGGTGGAGGC CAATCCTGAC TCCCACACCG CCCATGATGC CCTGGCAAGA
GCCTATGGCG AGCTAAAGAT GTTTGACTTA GCCATAGCCC AGCAGAAGCA GGCGCTGGCC
AAGACAGACC ATCCCTTCTG GACCCGTAAA TACAGCGAGA GCCTGGCGGC GCTAGAGGCG
CAGCGGCACT AA
 
Protein sequence
MINKWIAGVI LLLGSSLNLV QAAPTNLETL MVKAPGVDKP MAFKVTLPAS YGENLDKRYV 
LLFDFHPRSR GYLEGMHDWM SHNGDWPWLE TIIVTAPDGD QALGKLKSQA IEQEGSVALL
DFMGQSLLPA IDAKYRTNGF RIMNGFTGNA GLVLYTLLNR PELFNAYLAA SPVLSDDFAY
VIKSAADKLE KLKGKPRYLM LTTSDSDFEQ RQLEDFAALE ELLETTNHPA LHYKVKRFDG
TYYMTQPILA TAYGIEWLFD DYHRVLSPDS DIAKGGVKAI LDHYSYLSQQ KYGFPVPSTD
SLIALADAEF AKDKDNGLAV YLAAVEANPD SHTAHDALAR AYGELKMFDL AIAQQKQALA
KTDHPFWTRK YSESLAALEA QRH