| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3760 |
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| Symbol | |
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| ID | 4920752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4477818 |
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| End bp | 4479446 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640165386 |
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| Product | KAP P-loop domain-containing protein |
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| Protein accession | YP_001095885 |
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| Protein GI | 127514688 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4928] Predicted P-loop ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0432517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAC AAATTATGAT TGATTGGTCA AGCCCACTTC AAACAGAAGA CGGCAGGGAG
AACTTCCCTG CCGACCAGCT AGATCGCGCA AAATATGCGG AGTTTCTGAC ACATTTTTTG
GCTTCTAAGG GAGCTGGTAG TTCAGACGAG AGACATAACT ATGTATTAAA TTTGAACGCC
GAATGGGGAG CTGGTAAATC TTACTTCCTG CGTCGCTGGG CGGCAGAATT GAAAGAGAAA
TACCCCGTTG TTTATGTAGA CGCTTGGAAG CAAGACTACT CAGACGATCC CTTAATGACT
GTCATCTCAT CGATGATAAA GCAGTTAAGA GAACAAGCAG GGAAAAGCGA AGAAGATCCT
CTATTTAAAA CACCACGTAA ATTAATAGGC TTACTCAAAG CTGCCGCGCC AAGCATTGCA
AGAGGAGTTG CAACCAAATA CTTAGGTATA GATCCCGTAA AAATCATTCA ACAAGCTGAT
GATGACGATA TTGGTGAGAC GGTTAAAGAC CGAAATGGAC AAGATATCGA TATGGGGCTA
GCAGCCTCTA AAATAGTCGA ACACTTAATC AAGGATCACG ATGCCAAATC TGATGCAATA
GCCAGTTTAA AGCTAAGTGT TGAAGAGTGG GTCAGAGCCG TCGCCGGACT TCGAGAAAAG
CAGCATCCCG CATTTATATT TATCGATGAA CTCGATCGAT GCAGGCCTAG TTATGCGGTT
GAAATGCTGG AGACGATCAA GCACATTTTC GATATTCCCG GCGTGGTATT TGTCGTTGCC
ACTGATACAG AACAACTACA ACACACAATA AAGGCGATCT ACGGCGAAGG CTTCGATGCC
CGCACCTACC TTGGCAGGTT CTTTAACAGT CGTTACACCC TAAAGGCACC CTCTTTTGAA
AAGTTACTTT CAGTTCATTG TGATATGAAA AAATTATCTG AATCATACTT TAACGATAGA
AATATCGAGA ACTGGCCAGA ACTTGATGTC CAGAGTGAAG GCTCTGATTT AATACCACTC
AAAAATCTAA CGACCATGTA TAACGTCTTT TCGTTATCGG CAAGGCAAGT CATTCAAACA
ACAGAACGCC TCATTTCTGT TGTCGAAAAT CTAAAGACCA ATTCACACAT AAACCTGCTC
TATCTAGCAT TCCTGCTCTG TCTGAGAGAG AAAAATCAGA TGTTATATGA CTTAGTTTTA
ACAAAGGATT TGATACATCA ACTTGATAAT AAAAAACAAT TACATTACGA ATTAATGGAA
ATAGTTTCGG CCAGTGACCC AGAAAAATTA AGTTTCAACC TAAAGCCGAG TAATTTATTT
TCAGTCGGAC ATGCCAACTA TTTAAACTCT ATAGCAGACA ACCTTATTTC AGATGGGCAA
TATGAATTAG GTGTTTACCA ATTTATAGAG GTCTCACATA CTCTCATAAA ATCAGTTTCA
AGAATCTCAA ACCTTAGGAA TGAGGCCATT CGTTCTTTGT CAAATAGGAA TCAAACTCCA
GATATAAAAA ATTGGTTTGT TATTATCGCT GAAATTGAAA ATAAAAAAAG TAACTATAAC
AATTCGGCAT ACAAGGATTT AGTCGAACTC GCTTCCGCAC TAGATGTACC TGAATCAAAA
ATTGCATAA
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| Protein sequence | MASQIMIDWS SPLQTEDGRE NFPADQLDRA KYAEFLTHFL ASKGAGSSDE RHNYVLNLNA
EWGAGKSYFL RRWAAELKEK YPVVYVDAWK QDYSDDPLMT VISSMIKQLR EQAGKSEEDP
LFKTPRKLIG LLKAAAPSIA RGVATKYLGI DPVKIIQQAD DDDIGETVKD RNGQDIDMGL
AASKIVEHLI KDHDAKSDAI ASLKLSVEEW VRAVAGLREK QHPAFIFIDE LDRCRPSYAV
EMLETIKHIF DIPGVVFVVA TDTEQLQHTI KAIYGEGFDA RTYLGRFFNS RYTLKAPSFE
KLLSVHCDMK KLSESYFNDR NIENWPELDV QSEGSDLIPL KNLTTMYNVF SLSARQVIQT
TERLISVVEN LKTNSHINLL YLAFLLCLRE KNQMLYDLVL TKDLIHQLDN KKQLHYELME
IVSASDPEKL SFNLKPSNLF SVGHANYLNS IADNLISDGQ YELGVYQFIE VSHTLIKSVS
RISNLRNEAI RSLSNRNQTP DIKNWFVIIA EIENKKSNYN NSAYKDLVEL ASALDVPESK
IA
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