Gene Shew_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3759 
Symbol 
ID4920751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4476162 
End bp4477388 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID640165385 
Productimidazolonepropionase 
Protein accessionYP_001095884 
Protein GI127514687 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0456459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGGG ATCAGGTTTG GATTGACGTC AACATCGCCA CTATGGACCC TGAAATTTCA 
GCGCCTTACG GTGCGATCAC CGATGCCGCC ATCGCCGTCA AGGAGGGCAA GATCGCCTGG
ATGGGTCCCC GTAGCGAGCT ACCCGAGTTC GATGTCTTGT CAACGCCGGT TTACAGAGGC
AAGGGCGGCT GGCTCACGCC GGGCCTTATC GATGCCCACA CCCACCTGGT GTTCGCTGGC
AACCGCGCCA ACGAGTTTGA GCTTCGCCTC CAAGGTGCCA GCTATGAAGA GATCGCCCGC
GCCGGCGGCG GCATCATCAG CACGGTCAAG GCCTGCCGCG AGGCCAGCGA GGCCGAGCTG
TTCGAACTGG GACGCCAACG CCTCAACGCC CTCGCCAAAG AAGGGGTAAC CACGGTCGAG
ATAAAATCTG GCTACGGTCT GGACACAGAA ACCGAGCTCA AGCTCCTCAG GGTCGCCCGC
GAGCTAGGCA AGCATCATCA TGTGGATGTG AAGACCACCT TCCTCGGCGC CCATGCCATT
CCGCCCGAGT ATAAAGATAA CAGCGACGCC TATGTGGACC TGGTGATCGA CGAGATGCTG
ACCGCGGTGA TTAACGAAAA CCTGGCCGAT GCCGTGGATG TCTTCTGTGA AAATATCGCC
TTCAGCCTGG AGCAGACAGA GCGGGTGCTG AGCACCGCCA AAGCGGCCGG ACTGGATATC
AAGCTGCACG CCGAGCAGCT CTCTAACCTG GGCGGGTCGG CCATGGCCGC CAAATTGGGC
GCCAAGTCGG TGGATCATAT CGAATACCTG GACGAGGTAG GCGTGAAGGC CCTGAGCGAG
AGCGGCACCT GTGCCACCCT GCTCCCCGGC GCCTTCTACT TTCTGCGGGA AACCCAGATG
CCGCCTATCG ACCTGCTGCG CCAATATGAG GTACCTATGG TGCTGGCCAG CGACTATAAC
CCAGGCTCAT CGCCGCTATG CTCTAGCCTG CTGATGCTCA ACATGGGCTG CACCCTGTTC
CGCCTCACCC CAGAGGAAGC CCTGGCGGGC ATGACACGTA ACGCCGCCAA GGCGCTGGGA
GTCGAGGACT CGGTCGGCGT ACTCAAACCT GGCATGCAGG CCGACTTCTG TCTATGGGAT
ATCACCACTC CAGCGGCACT GGCCTACAGC TATGGGGTGG ATGTGTGTAA GGAAGTGGTA
AAAAACGGAA AGTTGGTTCA TCAATAA
 
Protein sequence
MSWDQVWIDV NIATMDPEIS APYGAITDAA IAVKEGKIAW MGPRSELPEF DVLSTPVYRG 
KGGWLTPGLI DAHTHLVFAG NRANEFELRL QGASYEEIAR AGGGIISTVK ACREASEAEL
FELGRQRLNA LAKEGVTTVE IKSGYGLDTE TELKLLRVAR ELGKHHHVDV KTTFLGAHAI
PPEYKDNSDA YVDLVIDEML TAVINENLAD AVDVFCENIA FSLEQTERVL STAKAAGLDI
KLHAEQLSNL GGSAMAAKLG AKSVDHIEYL DEVGVKALSE SGTCATLLPG AFYFLRETQM
PPIDLLRQYE VPMVLASDYN PGSSPLCSSL LMLNMGCTLF RLTPEEALAG MTRNAAKALG
VEDSVGVLKP GMQADFCLWD ITTPAALAYS YGVDVCKEVV KNGKLVHQ