Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3759 |
Symbol | |
ID | 4920751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4476162 |
End bp | 4477388 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640165385 |
Product | imidazolonepropionase |
Protein accession | YP_001095884 |
Protein GI | 127514687 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0456459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGG ATCAGGTTTG GATTGACGTC AACATCGCCA CTATGGACCC TGAAATTTCA GCGCCTTACG GTGCGATCAC CGATGCCGCC ATCGCCGTCA AGGAGGGCAA GATCGCCTGG ATGGGTCCCC GTAGCGAGCT ACCCGAGTTC GATGTCTTGT CAACGCCGGT TTACAGAGGC AAGGGCGGCT GGCTCACGCC GGGCCTTATC GATGCCCACA CCCACCTGGT GTTCGCTGGC AACCGCGCCA ACGAGTTTGA GCTTCGCCTC CAAGGTGCCA GCTATGAAGA GATCGCCCGC GCCGGCGGCG GCATCATCAG CACGGTCAAG GCCTGCCGCG AGGCCAGCGA GGCCGAGCTG TTCGAACTGG GACGCCAACG CCTCAACGCC CTCGCCAAAG AAGGGGTAAC CACGGTCGAG ATAAAATCTG GCTACGGTCT GGACACAGAA ACCGAGCTCA AGCTCCTCAG GGTCGCCCGC GAGCTAGGCA AGCATCATCA TGTGGATGTG AAGACCACCT TCCTCGGCGC CCATGCCATT CCGCCCGAGT ATAAAGATAA CAGCGACGCC TATGTGGACC TGGTGATCGA CGAGATGCTG ACCGCGGTGA TTAACGAAAA CCTGGCCGAT GCCGTGGATG TCTTCTGTGA AAATATCGCC TTCAGCCTGG AGCAGACAGA GCGGGTGCTG AGCACCGCCA AAGCGGCCGG ACTGGATATC AAGCTGCACG CCGAGCAGCT CTCTAACCTG GGCGGGTCGG CCATGGCCGC CAAATTGGGC GCCAAGTCGG TGGATCATAT CGAATACCTG GACGAGGTAG GCGTGAAGGC CCTGAGCGAG AGCGGCACCT GTGCCACCCT GCTCCCCGGC GCCTTCTACT TTCTGCGGGA AACCCAGATG CCGCCTATCG ACCTGCTGCG CCAATATGAG GTACCTATGG TGCTGGCCAG CGACTATAAC CCAGGCTCAT CGCCGCTATG CTCTAGCCTG CTGATGCTCA ACATGGGCTG CACCCTGTTC CGCCTCACCC CAGAGGAAGC CCTGGCGGGC ATGACACGTA ACGCCGCCAA GGCGCTGGGA GTCGAGGACT CGGTCGGCGT ACTCAAACCT GGCATGCAGG CCGACTTCTG TCTATGGGAT ATCACCACTC CAGCGGCACT GGCCTACAGC TATGGGGTGG ATGTGTGTAA GGAAGTGGTA AAAAACGGAA AGTTGGTTCA TCAATAA
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Protein sequence | MSWDQVWIDV NIATMDPEIS APYGAITDAA IAVKEGKIAW MGPRSELPEF DVLSTPVYRG KGGWLTPGLI DAHTHLVFAG NRANEFELRL QGASYEEIAR AGGGIISTVK ACREASEAEL FELGRQRLNA LAKEGVTTVE IKSGYGLDTE TELKLLRVAR ELGKHHHVDV KTTFLGAHAI PPEYKDNSDA YVDLVIDEML TAVINENLAD AVDVFCENIA FSLEQTERVL STAKAAGLDI KLHAEQLSNL GGSAMAAKLG AKSVDHIEYL DEVGVKALSE SGTCATLLPG AFYFLRETQM PPIDLLRQYE VPMVLASDYN PGSSPLCSSL LMLNMGCTLF RLTPEEALAG MTRNAAKALG VEDSVGVLKP GMQADFCLWD ITTPAALAYS YGVDVCKEVV KNGKLVHQ
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