| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3757 |
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| Symbol | |
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| ID | 4920749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4473477 |
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| End bp | 4475147 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165383 |
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| Product | urocanate hydratase |
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| Protein accession | YP_001095882 |
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| Protein GI | 127514685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2987] Urocanate hydratase |
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| TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0181663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA GACACGACCC TAGCCGTCGC ATCATAGCGC CACATGGCAC TACGCTGAGC
TGTAAGAGCT GGCTCACCGA GGCGCCGATG CGCATGCTGA TGAACAACCT GCACCCAGAT
GTCGCCGAGC GTCCGGAAGA CCTGGTGGTC TACGGCGGTA TCGGCCGTGC GGCCCGTGAC
TGGCAATGCT ATGACAAGAT CGTAGAGGTG CTGCAGCGCC TAGAAGAAGA TGAGACCCTG
CTGGTACAGT CGGGCAAGCC TGTGGGCGTG TTCAAGACCC ACAGCAACGC GCCGCGCGTC
ATCATCGCCA ACTCTAACCT GGTGCCACAC TGGGCCAACT GGGAACACTT CAACGAGCTG
GATAAGAAGG GCCTGGCCAT GTATGGCCAG ATGACTGCAG GTTCTTGGAT CTACATCGGC
TCTCAGGGCA TTGTCCAGGG CACCTACGAG ACCTTCGTGG CCATGGCCAA GCAACACTTT
GGTGGCGATG CCAGCGGCAA GTGGATCCTC ACCGGCGGCC TGGGTGGCAT GGGTGGCGCT
CAGCCACTGG CCGGCACCAT GGCGGGCTAC TCTGTACTGG CCTGTGAGGT GGACGAGACT
CGCATCGACT TCCGTCTACG TACCCGTTAT GTGGACAAGA AGGCCACTAG CCTGGATGAG
GCGCTGGCGA TGATCGACGA AGCCAACAAG AGCGGCAAGC CAGTGTCTGT CGGCCTGCTG
GCCAACGCCG CCGACATCTT CGCCGAGCTG GTAGAGCGTG GCATCACCCC GGATGTAGTG
ACCGACCAGA CCTCGGCCCA CGATCCACTA AACGGCTATC TGCCACAGGG TTGGACCCTG
GAATACGCCG CCGAGATGCG TAAGCAAGAT GAGGCGGCCG TGGTTAAGGC GGCCAAGCAG
TCGATGGCGG TACAGGTTAA AGCCATGCTG GCCCTGCAGG CGGCAGGTGC GGCCACCACA
GACTATGGTA ACAACATTCG CCAGATGGCG TTCGAAGAGG GCGTGGAAAA TGCCTTCGAC
TTCCCAGGCT TCGTGCCCGC CTATGTGCGC CCACTCTTCT GCGAAGGCAT AGGTCCCTTC
CGCTGGGCGG CGCTCTCTGG CGATCCGGAA GATATCTACA AGACAGATGC CAAGGTGAAG
GAGCTGATCC CAGACAACCC ACACCTGCAT AACTGGCTGG ACATGGCGCG TGAGCGCATC
GCTTTCCAGG GCCTGCCGGC ACGTATCTGC TGGGTCGGCC TGAAAGACAG GGCGCGTCTG
GCTAAGGCCT TCAACGAGAT GGTGAAAAAC GGTGAGCTGT CGGCGCCAAT CGTGATCGGT
CGTGACCATC TGGATTCTGG CTCTGTGGCA AGCCCTAACC GCGAGACCGA ATCTATGCTT
GACGGCAGCG ATGCGGTATC GGATTGGCCG CTGATGAACG CCCTACTTAA CACGGCAAGC
GGCGCGACCT GGGTGTCTCT GCACCATGGC GGCGGCGTCG GCATGGGCTT CAGCCAACAC
TCGGGTGTGG TGATCGTTGC CGATGGTACC GACGAGGCCG AGGCGCGTCT GGGCCGTGTG
CTGTGGAACG ACCCTGCCAC TGGCGTGATG CGTCATGCGG ATGCTGGCTA TGAGATCGCC
AAGCAGTGCG CCAAGGAGCA GGGCCTGGAT TTGCCTATGC TCGACCTATA A
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| Protein sequence | MDKRHDPSRR IIAPHGTTLS CKSWLTEAPM RMLMNNLHPD VAERPEDLVV YGGIGRAARD
WQCYDKIVEV LQRLEEDETL LVQSGKPVGV FKTHSNAPRV IIANSNLVPH WANWEHFNEL
DKKGLAMYGQ MTAGSWIYIG SQGIVQGTYE TFVAMAKQHF GGDASGKWIL TGGLGGMGGA
QPLAGTMAGY SVLACEVDET RIDFRLRTRY VDKKATSLDE ALAMIDEANK SGKPVSVGLL
ANAADIFAEL VERGITPDVV TDQTSAHDPL NGYLPQGWTL EYAAEMRKQD EAAVVKAAKQ
SMAVQVKAML ALQAAGAATT DYGNNIRQMA FEEGVENAFD FPGFVPAYVR PLFCEGIGPF
RWAALSGDPE DIYKTDAKVK ELIPDNPHLH NWLDMARERI AFQGLPARIC WVGLKDRARL
AKAFNEMVKN GELSAPIVIG RDHLDSGSVA SPNRETESML DGSDAVSDWP LMNALLNTAS
GATWVSLHHG GGVGMGFSQH SGVVIVADGT DEAEARLGRV LWNDPATGVM RHADAGYEIA
KQCAKEQGLD LPMLDL
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