| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3751 |
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| Symbol | |
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| ID | 4920926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4467872 |
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| End bp | 4468495 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165377 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001095876 |
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| Protein GI | 127514679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00540648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTTAG ATACCTGGCT ACTCTACCTG GCGGCGATCC TGCTTATCGC CATCTCCCCC
GGCACCATGG CGGTGCTGTC CATGAGTCAT GGGATCCATT TCGGCAAGGT GCGCAGCCTG
GCCACCGCCC TGGGTAGCGT CAGCTCGGCC CTCTTGTTGA TGTTTGCCTC AGCCGCCGGC
CTGGGTGCGC TGCTGAGCGC CACAGAGTAT GGCTTTACCC TACTTAAGTA TTGCGGCGCG
GCCTACCTTA TCTATCTGGG GATCAAGCTG ATACTGACCA AGGCCAGTGC CCAGGGGCTG
GACCTGCAAC ACATCAAGGG CAAGGGCTCG CCTAAGCAGA TGTTTAAAGA GGCCTTTCTG
GTGGGGATAA GCAATCCTAA GGATCTGCTC TTCTTCGGCG CCCTGTTTCC GCAGTTTATC
GATATCACGG CGCCCCAAGG GCCACAGCTC GCCATACTGG CGCTCACCTG GGCCCTGGTG
GATTTCAGCT TCGTGATGAT CTACGCCAGC ATGGCAAACG TGTTGGCCCC AAAACTCAGG
GCCAGCAACC GTCTGCATTG GTTCGACCGT ACCAGTAGCG GCGTATTTCT CTCCCTGGCC
GCCATACTGG TGACGAAAGA CTAA
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| Protein sequence | MNLDTWLLYL AAILLIAISP GTMAVLSMSH GIHFGKVRSL ATALGSVSSA LLLMFASAAG
LGALLSATEY GFTLLKYCGA AYLIYLGIKL ILTKASAQGL DLQHIKGKGS PKQMFKEAFL
VGISNPKDLL FFGALFPQFI DITAPQGPQL AILALTWALV DFSFVMIYAS MANVLAPKLR
ASNRLHWFDR TSSGVFLSLA AILVTKD
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