| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3747 |
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| Symbol | |
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| ID | 4920922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4464226 |
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| End bp | 4465848 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165373 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095872 |
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| Protein GI | 127514675 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000418907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACTATC TCGTCGCCAG TTGTATTGCA CTCCTGTTAG GCCCACTCTT CTATCGTTTC
TTTACGACGG GGACAGGTCT GCAAAAAGGC TTGGATGGTT TCATCTTCGT GTCCCTTGGC
GGCCTGGTGT TGATCCATAT CCTGCCCGAG CTTCTGGAGC ACGGCGGTTT CCTCTCCCTG
CTGTTTGTTG TCGTCGGCCT CTGGGGCCCG ACCCTGAGCG AGCGCTTGTT TCACCGCTAT
TCAGAGGTCA CCCATAATCT GACCCTGACA CTCGGCATAG GCGGCCTGCT GTTGCATACC
CTCACAGATG GCGGCGCCAT GGTGCTGGCC CAACAGGACG GTAACTCCAG CCTGCTGGCC
CTGGGGGTGA TTCTGCATCG TCTGCCTGTG GGGCTGGCGA TCTGGTGGCT GCTCAAGCCT
CAGGTAGGTA GTCGCTGGGC ATCCATAGTG TTGGGCGGCA TGATGCTGCT AACAGGCGTG
GGCTATTTCG CCGGCGAGCA GCTGCTGGCG CAGCTAAGCC TGGACAACAC CGTCTATCTG
CAAGCCTTCG TCACCGGCTC GATTCTGCAC GTGGTGCTGC ATCAGCCCCA TGGGCACACC
ATAGACGACA AGCAGGGTAA GTATGAATAT CAGGCCGGCA TAGGCAGCCT TTTGGGTATC
GCCCTGCTGT TTGTGCTGCT GGCGTTCGAC TCCGGCGGCC ACGATCATCA CGAACACAGC
CACAGCAGCG AGCAACTGCT GGACTGGCTG CTGACCCTGG CGCCAGTGCT CCTGCTGAGC
TATAGCCTGG CGGCGATGCG CTATCTGTTT GGCCTGTCGC CTCACCATGA GCGCCTGAGC
CAGCGCTGGC TGCAACGCCT GGCGGGGCCA GAGGCTCTGG TGATCACCCT GCTGCTCCTG
GGACCTAGCC TGGCATTTAT CCAGTTGATC GGCCTGACAT TGGTGGGGAT CTTACTCACC
ATGACGCGGG TCGAACCCAC AGATCCTCAT CTGGGATTAC CTAACTCCGC CTGGCGCTTC
GGCTTCGCCC ACCTGGTGGA TCGCAGCGCC CCCTGGATCA TCCTCAGCCT GGTGCTGGCC
AACCTTATCG GACACCCGTC TGTGCCCCTC ACCTCACCTC TGGTGCAGGT TGGCGTATTG
CTCCTGCTGC TTCTGCCGAT GCGTTTCTGT AATCTCGGCG GCGCGGTATT GGCACTGTCC
CTGGCCTACA GCGGCTGGAC CATGGAAGCC GTGATGCTGG TGTTGCTGGC GGCCCCCGTC
TTTAACCTGG CACAGCTGAA ATTGATGGAT TGGACCCAGC GTCTGGCACT GGCCGGGGTG
ATCGGCCTCT GCCTGCTTGG CACCCACTGG TTGATCCCTG AATGGAGCCG GCTGCTCAGC
CTGCCCGAGA CGGTCAACCA GTTGAGCCTG GCACTGGCCG CCATGCTGTT TGCCGCCAGC
CTGCTACGAC TGGGGCCGCG CAAGTTTATG GCCCGCATCA TGTTGTGGAA GCCTAAGGCT
CATGATCACA GCCATTCGCG TACGAATAGT CATGACCACA GCCATGAACC TGCTAACGGT
CATGAACACA AGCACAGCCA TGAGCACAAA CACACACATC ATCATGAGCA CGGCCAGCAC
TAG
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| Protein sequence | MYYLVASCIA LLLGPLFYRF FTTGTGLQKG LDGFIFVSLG GLVLIHILPE LLEHGGFLSL
LFVVVGLWGP TLSERLFHRY SEVTHNLTLT LGIGGLLLHT LTDGGAMVLA QQDGNSSLLA
LGVILHRLPV GLAIWWLLKP QVGSRWASIV LGGMMLLTGV GYFAGEQLLA QLSLDNTVYL
QAFVTGSILH VVLHQPHGHT IDDKQGKYEY QAGIGSLLGI ALLFVLLAFD SGGHDHHEHS
HSSEQLLDWL LTLAPVLLLS YSLAAMRYLF GLSPHHERLS QRWLQRLAGP EALVITLLLL
GPSLAFIQLI GLTLVGILLT MTRVEPTDPH LGLPNSAWRF GFAHLVDRSA PWIILSLVLA
NLIGHPSVPL TSPLVQVGVL LLLLLPMRFC NLGGAVLALS LAYSGWTMEA VMLVLLAAPV
FNLAQLKLMD WTQRLALAGV IGLCLLGTHW LIPEWSRLLS LPETVNQLSL ALAAMLFAAS
LLRLGPRKFM ARIMLWKPKA HDHSHSRTNS HDHSHEPANG HEHKHSHEHK HTHHHEHGQH
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