| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3746 |
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| Symbol | |
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| ID | 4920921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4463404 |
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| End bp | 4463997 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165372 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_001095871 |
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| Protein GI | 127514674 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000432224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACATCT TTTCTGCTGC GGTAATGTTG TTTTTGATCA TGGACCCCCT GGGGAACTTA
CCCATTTTCG CCTCGATTCT TCGTCATATC GAACCTAAGA AGCGGCGCAA GGTGCTAGTG
CGGGAGCTGA TCTTCGCGCT GATCATCATG CTGCTCTTCC TGTTTGCCGG CGAGGCGATT
CTCAGCTTCT TAAACCTGAG ATCTGAGTCG GTCAGCATAG CCGGTGGCAT CATACTCTTC
CTTATCGCCA TTCGGATGAT CTTCCCTCAG CCAGGTGGTG TGGTGGGGCT GGCGGCCGGA
GAAGAGCCCT TTATCGTGCC TATGGCGATC CCCCTGATGG CCGGCCCATC TGTGTTGGCG
GCACTGATCC TGCTGGCCCA TACCGACAGC TCGCGCATGA TGGATTGGAC CATAGCCCTG
TTTGCTGCCT GGGTGGCCAG CGCCGTGATT CTGCTCTTCT ATAAGCTGTT TACCAAACTT
CTTGGTGAGA AGGGGCTGAC GGCGGTGGAG CGCCTGATGG GCATGGTGCT GGTGATGATC
TCGGTGCAGA TGTTCCTCGA CGGCGTGGCC CAATATATCG CTCACGCCAG CTAA
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| Protein sequence | MDIFSAAVML FLIMDPLGNL PIFASILRHI EPKKRRKVLV RELIFALIIM LLFLFAGEAI
LSFLNLRSES VSIAGGIILF LIAIRMIFPQ PGGVVGLAAG EEPFIVPMAI PLMAGPSVLA
ALILLAHTDS SRMMDWTIAL FAAWVASAVI LLFYKLFTKL LGEKGLTAVE RLMGMVLVMI
SVQMFLDGVA QYIAHAS
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