| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3741 |
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| Symbol | |
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| ID | 4920916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4455319 |
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| End bp | 4456515 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165367 |
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| Product | putative SAM-dependent methyltransferase |
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| Protein accession | YP_001095866 |
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| Protein GI | 127514669 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3129] Predicted SAM-dependent methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00207875 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCGT CTCGAAAGCC TGCGCGTCCC GGCGCCAAGA AAGTTGTTTC TCAAGAGCCG
TCTGCTAAGG CCTCAAGGCC AAAGCCTTCG TCTCAATCTA AATCAAAAGC TCAGCCAAAA
GCTAAGCCAG AATCGAAACC ACAAGCAAAA TCACAAGCAA AACCACAAGC CAAGTCTAAG
CCAGTAGAGG GCAAGAGCCA GGGGGCGAGC AAGGGGCTGC ACCCTCGCAA CCTGCATGGG
CAGGGTTATG ACTTCGACGC GCTGATGGAT ACCACACCAG AGCTTAAGCC CTTCGTTCGT
CCCAATCCCT ATGGCAACTT GTCTATCGAC TTTGCCGATC CCAGGGCGGT GAAGCTGCTT
AATCTGGCGC TGCTCAGGCT GCATTATGGA TTGAGCTATT GGGATATTCC CGAGGGTTTT
CTCTGCCCGC CTATCCCGGG TCGTGTGGAC TACCTGCATT ATCTGGCGGA TCTGCTGGCC
GAATCGACTC CCGCGAGCAA GGGGGGTAAG CGCAAGCTGC CTAATGTGAC GAGAGCGCCC
AAGGGGGAGC GAGTGGTCGC CCTAGATATC GGCACAGGCG CCAATGGCAT CTATCCACTG
CTGGGACATC AGGTCTACGG TTGGCGCTTC GTGGCAAGTG ATATCGACCC GGTGTCCCTT
AAGAATGTCG AGCGGATCAT AGCAAACAAC CCACAGCTGG CGGGTAAGCT GAGCCTACGC
CTGCAGTCAG ATTCGAAACA GATCTTTACC GGTATTATCA GGGCCGAGGA CAGGTTCGAT
CTGACCCTGT GTAACCCGCC ATTTCATGCC TCTCTTGCGG AGGCGAGCAG GGGCAGCGAA
CGCAAGCTGA AGAATCTTGC GGCCAACAAG CGAGCCAAGG GACATGAGGT TGCGAAGAGT
AAGGAGAAGC TCAACTTCGG CGGCCAGAAG GCTGAGCTCT GGTGCGAAGG GGGCGAGCAG
GCCTTCCTCG GCCAGATGAT CCGTGAGAGC CAGAAGTTCG GCTCGCAGTG CCTCTGGTTT
ACCTCTCTGG TGTCGAAGAA GGAGAATCTT AAGCCCTGCT ATCGTCTGCT GGAACAGGTG
GGCGCCAAGC GGGTAGAGAC CCTTGAGATG GCCCAGGGTA ATAAGCTGAC TCGAGTGCTG
GCCTGGACCT TCCTGACGCC AGAGCAGCAT AGTCTCTGGG GCCTGTATCG GGTTTAG
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| Protein sequence | MTPSRKPARP GAKKVVSQEP SAKASRPKPS SQSKSKAQPK AKPESKPQAK SQAKPQAKSK
PVEGKSQGAS KGLHPRNLHG QGYDFDALMD TTPELKPFVR PNPYGNLSID FADPRAVKLL
NLALLRLHYG LSYWDIPEGF LCPPIPGRVD YLHYLADLLA ESTPASKGGK RKLPNVTRAP
KGERVVALDI GTGANGIYPL LGHQVYGWRF VASDIDPVSL KNVERIIANN PQLAGKLSLR
LQSDSKQIFT GIIRAEDRFD LTLCNPPFHA SLAEASRGSE RKLKNLAANK RAKGHEVAKS
KEKLNFGGQK AELWCEGGEQ AFLGQMIRES QKFGSQCLWF TSLVSKKENL KPCYRLLEQV
GAKRVETLEM AQGNKLTRVL AWTFLTPEQH SLWGLYRV
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