| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3740 |
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| Symbol | |
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| ID | 4921034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4453855 |
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| End bp | 4455297 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165366 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001095865 |
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| Protein GI | 127514668 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00227037 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAAATT TTCGGCCGCT ACTCTTTATC TTAGGCGTGT TCCTGTCGAC CCTGACCGCC
TTTATGTTTT TTCCGCTGCT CTTCGCCCTA CTCTATGGCG AGGAGACGGT GGGCGCCTTC
ATGATCGCCT CGCTGATCAC AGGCACCTGC GCCAGCGCCT GTATGCATCA GGGGCAGAGT
GAAAACATCC GCCTCAATAT CCGCGATATG TTTCTGCTCA CCAGCCTGAC TTGGTTTATC
GTCAGCCTGT TTGCGGCCAT GCCCTTCACC CTCTATCACG GCATCAACTA CACAGACGCC
TTCTTCGAGA CCATGTCGGG GATCACTACC ACGGGATCTA CCGTACTGTC CGGCCTGGAT
ACCATGGATC ACAGCATCCT AATCTGGCGC TCGCTGCTGC AATGGCTGGG GGGGATAGGC
TTTATTGTGA TGGCGGTTGC CATTCTGCCG TTTCTCAACG TGGGGGGTAT GCGGCTGTTT
CGTACCGAAT CTTCGGACTG GAGCGATAAG GCAGTGCCTC GCACCCAGGA TATGGCCAAG
CACCTCTTCT ATGTCTACAT CATACTGACG GTCTGCTGCG GTGTGGCCTA CCACCTGGCG
GGGATGACCT GGTTTCAGGC TATAAACCAT GCCATGACCA CACTCTCCAC CGGCGGCTAC
TCCACCTCAG ACAGCTCCAT GGCGGCCTTC TCCAAGCCCG CCCACTGGGT CGGCACCATC
TTCATGGCAG CCGGCGGCTT ACCCCTGCTG ATGTTCGTCC ACAGCCTGTC CCAGCGTTCG
CTGCGGATCT GGAACGATGC CCAGGTGAAG GGCTACCTCA TCTTCCTGGC ATTCGTCTCC
TGCAGCCTGG CCTTCTGGCT CTGGCATGGA CACGAGATGA CGGCAGCCGA CGCTCTGCGC
CTGGCCAGCT TTAACGTGGT CTCGGTGGTA ACGACCACAG GCTATGGCCT CACCGACTAC
ACCTCCTGGG GCGCGGTGGC CAACGTGGCC TTCCTCTTCC TGATGTTTGC CGGCAGCTGT
TCGGGCTCTA CCTCTGGGGG AATTAAGATC TTCCGTTTCC AGATCGCCAT TGCCATCATG
CGTGAGCAGC TGAAACAACA GTTCCACCCT AACGGTATCT TCAAGGAGCG CTACAACGGA
CGCCCCATCA CAGAAGATAT CGTGCGCTCC CTGGTGACCT TCATCCTACT GTTTATGCTG
GTGATAGTGC TCTTGTCGGT GATCTTGGTG TCTACCGGAC TCGACCCGAC CACCAGCTTT
ACCGGCGCGG TGACGGCGGT GACCAATGTG GGCCCAGGGC TTGGGCCAGT GATCGGTCCG
GCGGGGAACT TCTCCAGCCT GCCGGACATC GCCAAATGGT CACTGGCCAT CGGCATGCTG
CTGGGGCGTC TGGAGATCCT GACGGTGGCG GTGCTTTTCC ACCCTAACTT CTGGAAGTAC
TAA
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| Protein sequence | MLNFRPLLFI LGVFLSTLTA FMFFPLLFAL LYGEETVGAF MIASLITGTC ASACMHQGQS
ENIRLNIRDM FLLTSLTWFI VSLFAAMPFT LYHGINYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQDMAK
HLFYVYIILT VCCGVAYHLA GMTWFQAINH AMTTLSTGGY STSDSSMAAF SKPAHWVGTI
FMAAGGLPLL MFVHSLSQRS LRIWNDAQVK GYLIFLAFVS CSLAFWLWHG HEMTAADALR
LASFNVVSVV TTTGYGLTDY TSWGAVANVA FLFLMFAGSC SGSTSGGIKI FRFQIAIAIM
REQLKQQFHP NGIFKERYNG RPITEDIVRS LVTFILLFML VIVLLSVILV STGLDPTTSF
TGAVTAVTNV GPGLGPVIGP AGNFSSLPDI AKWSLAIGML LGRLEILTVA VLFHPNFWKY
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