| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3737 |
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| Symbol | |
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| ID | 4921031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4450151 |
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| End bp | 4451125 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165363 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_001095862 |
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| Protein GI | 127514665 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00219855 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAACCAC TCAAGATACT CTTTGCGGGT ACACCAGATT TTGCCGCCCG CCATCTACAA
GCCTTAATCG ATTCAGAGCA CCAGGTTATC GGAGTTTACT CCCAACCGGA CAGACCCGCG
GGCCGTGGTA AGAAACTACA GGCAAGCCCG GTCAAAGCCT TGGCACTCGA GCATGATATC
CCGGTCTACC AACCCGTGAG CCTGAGAAAC GAAGATGCCC AGGCAGAGCT CGCCGCTCTC
GGCGCCGACA TCATGGTGGT GGTCGCCTAT GGTCTGATCT TGCCTCAGGT AGTACTGGAC
ACCCCAAGAC TGGGTTGCAT CAATGTGCAT GGTTCCATCC TGCCTCGCTG GCGTGGCGCA
GCGCCGATTC AGCGCGCCCT GTGGGCCGGC GACGCGGCAA CCGGCGTCAC CATAATGCAG
ATGGATATAG GTCTGGATAC CGGCGACATG CTGCTCAAGA CCCATCTGCC AATCGAAGAT
AGAGACACCT CCGCCAGCCT GTATGAGAAG CTGGCCGAGC AGGGACCAAG CGCCCTGATC
CAGGCACTAA AAGGCCTCGC CGAAGGCAGC CTAACGCCTG AGCCACAGGA TGAAGCCCTA
GCCAACTACG CCGAGAAGCT CAGCAAAGAG GAGGCGCAGC TCGACTGGCG CAAACCGGCC
GAGCAGCTGT GGCGTGAAGT TCGCGCCTTC AACCCTTGGC CCGCGAGCCA CTTCCCCCAT
CAGGATGCGG CAATCAAGGT ATGGCAGGCC AGCGTGTCAA TTGAGGCGGC AAAGCAGGCC
CCAGGCACCA TCATCCGCGC CGACAAGCAG GGCATAGCGG TCGCCACCGG CGAAGGCGCG
CTGGTGCTCG AAACCATTCA GCTGCCGGGC AAGAAGGCCA TGGCGGTGGC CGACGTGCTT
AACGCCCGCG GCGACTGGTT TACCCCGGGC ACCCAATTAC AAGGCGTCAC CCCAGCAGAT
GAGGCGCAGG CATGA
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| Protein sequence | MKPLKILFAG TPDFAARHLQ ALIDSEHQVI GVYSQPDRPA GRGKKLQASP VKALALEHDI
PVYQPVSLRN EDAQAELAAL GADIMVVVAY GLILPQVVLD TPRLGCINVH GSILPRWRGA
APIQRALWAG DAATGVTIMQ MDIGLDTGDM LLKTHLPIED RDTSASLYEK LAEQGPSALI
QALKGLAEGS LTPEPQDEAL ANYAEKLSKE EAQLDWRKPA EQLWREVRAF NPWPASHFPH
QDAAIKVWQA SVSIEAAKQA PGTIIRADKQ GIAVATGEGA LVLETIQLPG KKAMAVADVL
NARGDWFTPG TQLQGVTPAD EAQA
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