| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3723 |
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| Symbol | |
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| ID | 4921080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4430676 |
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| End bp | 4431665 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165345 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001095848 |
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| Protein GI | 127514651 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.211444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAG CCCCAGTCTC TACAAGCACT GACACTATCG CCACCTCACT GCCGGCTTTT
TCCAGCGAAC TGACTGACAA TCGTCAGCAG CTAGATGCTT TCTGGCAGGG TGTCGAGCAG
GGTTATCTGA CGACAGGCGA TGGACTCAAG CTGGCCTACT GCGTGGCCGC TCACCCCGAG
TCGAATCAGG CGATAGTGAT CAGCAGCGGT CGTGTCGAGG CCTACCTTAA GTATCAAGAG
CTGATCTTCG ATCTCTATCA GCTGGGATAT AGCGTCTACG CCCTGGACCA CAGAGGACAG
GGGCTTTCAG ACAGGCTAAC CGACAATCCG CACCAGGGGC ATGTAGCGAA ATTTTCCGAC
TATGTGGATG ACCTTGGCCT CTTCGTCGAT ACCCTAGTCA TCCCCAAGCA ACATGACAGG
CTGTTTCTGG TGGGGCACTC CATGGGCGGC ACCATAGCGA CCCTGTATCT ACAGCAGGCA
CCCAAGGTGT TCGATGCGGC AGTGTTATCG GCACCCATGT ATGGCATCTG CCTGCCGATG
CCTAAGCCCT TCGTGCGTTG GTTGGCCGGA CACCTGGACA ATGGCTCGAG CAGCAAGCCC
AACTACGTCT TAGGGGGCAA GAACTATCAG CCCGTCCCCT TCGAGCAGAA CGAGCTCACC
CATAGCGCTA AGCGCTATCA AGACTATCGT CGGCTGTATG AGACCTACCC GCAGCTGCAG
CTGGGCTCCC CCACCAACCG TTGGCTAACC GAGTCCCTCG ATGCCTGCGA GCAAGCAGTA
GAAGCCGCGA AACACACTCA GACGCCTATC TTGATCTTAC AGGCAGAGGA AGACTCCATC
GTCGACAATC GCGCGCAAGA TGCTGCCAGG GGAGAGCATT GCCACCTGTT TAAGGTCGCC
CATGCCCGTC ATGAGATCTT CATCGAAAGG GATAGCGCCC GAAACCAGGC GCTGGGACAA
CTTGCAGACT TTCTCAGCCT ACACGCTTGA
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| Protein sequence | MSTAPVSTST DTIATSLPAF SSELTDNRQQ LDAFWQGVEQ GYLTTGDGLK LAYCVAAHPE
SNQAIVISSG RVEAYLKYQE LIFDLYQLGY SVYALDHRGQ GLSDRLTDNP HQGHVAKFSD
YVDDLGLFVD TLVIPKQHDR LFLVGHSMGG TIATLYLQQA PKVFDAAVLS APMYGICLPM
PKPFVRWLAG HLDNGSSSKP NYVLGGKNYQ PVPFEQNELT HSAKRYQDYR RLYETYPQLQ
LGSPTNRWLT ESLDACEQAV EAAKHTQTPI LILQAEEDSI VDNRAQDAAR GEHCHLFKVA
HARHEIFIER DSARNQALGQ LADFLSLHA
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