Gene Shew_3722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3722 
Symbol 
ID4921079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4428785 
End bp4430569 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content56% 
IMG OID640165344 
Producthypothetical protein 
Protein accessionYP_001095847 
Protein GI127514650 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.241744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAC CCTTAGCCCC TTGTCTACTC TTACTCAGCC TCACGGCCTG TCAAATGGCC 
CCTACGGCGG ATGTCGCCAC GACGCCTAAA ACCAGTGTCA GCCAGAGCCA TCAGCAATTA
CAGCGCATCA TGGACGATGC CTGGCAACTT AGATTAGAGT CTAGCCCAGA AATGGCCTAC
GCACAGGGAG ACGAGACGGC GGCGGGTAAA CTGGATGACC TCTCACCCGA GGCGCTGGCA
AACCATAACC AGGCAGAGCA GGCCCTGTTG GCACGCCTCA ATGCCTTAGA TTTGGCATCG
CTCAATAAGG CCGATCGCAT CGACGCTCAG ATACTCATCT ATCAGTTACA AAACAGTGTC
GATCAATACC GTTTCCACGA CCATTATCTA CCGATCACCG CAGAGAGTGG CTTTCACGCC
TATATCGCCT CCATCGCCAA GGGCAACTTC AACAGCGAGG CCGATTACCG CAATTACTTA
AGCAAGCTTG AGGCCCTGCC CCGCTATTTT TCGCAGCAGA CCTATTGGCT GAAACAGGGT
CTGGCCCAAG GCATCACCCC GGCGAGGGTG GTCTTAAACG GCTTCGAAGA GAGCATTAGT
GCCTTCATAG TGCCGGTTGA GCAGAGTGGT TATTTCAAGC CCTTCACCCA CTTTCCCAAG
CACTTTACCC AGGCCCAGAA AGCCGAGTTG ACGGAGCAGG GCAAGGCTTT GATTGAGCAG
AACGTACTGC CCAGCTATCA GGCCTTCTAT GACTTCATGA CCCAGGAATA TATCCCAGGC
GCACGGGAGA GTATTGCCGC CTACGATCTT CCCGACGGTA AAGCCTTCTA TGAGAATCGC
GTACGCTACT ACACTACACT GCCAATGACC GCAGACGAGG TGCACCAACT CGGGCTAAAA
GAGGTTAAGC GCATTCGCGC CGAGATGCAG GCGATCATAG ATAAGCTCGG CTATCAGGGC
AGCTTCGCCG ATTTCCTCCA CTTCCTGCGC ACCGATCCTC AGTTCTACGC CAAGACCCCG
GAGCAGCTGT TGAAAGAGGC CGCCTTTATC GCCAAGAAGG CCGATGCCAT GCTGCCGAAG
TTCTTCGGCA AGCTGCCGCG CACGCCCTAC GGCATCCAGG AGGTGCCCGC CGAGATCGCC
CCCAAATACA CCACGGGGCG TTATTCTGGC GCCAGTGGCG ATGACCAACC CGGCTATTAC
TGGGTCAACA CTTATGCCTT GGACAAACGT CCCCTGTATG AATTAGAAGC CCTGACCCTA
CACGAAGCCG TACCTGGCCA TCACCTGCAG ATCTCCCTCA ACAAGGAGCT GACCTCCCTG
CCTAACTTCC GTCGTTACAG CTATATCTCG GCCTTTGGCG AGGGATGGGG ACTCTACTCT
GAGTATCTCG GACTGGAAGG CGGTTTCTAC CAAGACCCCT ACAGCAACTT CGGCCGTCTG
ACCTACGAGA TGTGGCGCGC CGCCCGCCTG GTGGTCGACA CAGGCATGCA CGCCAAGGGT
TGGACACGTC AGCAGGCCAT CGACTATATG GCCGGCAATA CGGCGCTGTC GCTTCACAAT
GTCACGACGG AGATAGACAG GTATATCTCC TGGCCGGGAC AGGCACTGTC CTACAAGATA
GGCGAACTCA CCATCAAGCG TTTACGCGCC AAGGCCGAAC AGGCACTGGG TGAAAAGTTC
GACATCCGCG CCTTCCATGA CGCCGTCTTG GCCAATGGAT CTGTGCCCAT GGCGCTGCTG
GAACAGCAGA TAGATGACTT CATCGCCGCT CAGGCCGCTC GCTAG
 
Protein sequence
MYKPLAPCLL LLSLTACQMA PTADVATTPK TSVSQSHQQL QRIMDDAWQL RLESSPEMAY 
AQGDETAAGK LDDLSPEALA NHNQAEQALL ARLNALDLAS LNKADRIDAQ ILIYQLQNSV
DQYRFHDHYL PITAESGFHA YIASIAKGNF NSEADYRNYL SKLEALPRYF SQQTYWLKQG
LAQGITPARV VLNGFEESIS AFIVPVEQSG YFKPFTHFPK HFTQAQKAEL TEQGKALIEQ
NVLPSYQAFY DFMTQEYIPG ARESIAAYDL PDGKAFYENR VRYYTTLPMT ADEVHQLGLK
EVKRIRAEMQ AIIDKLGYQG SFADFLHFLR TDPQFYAKTP EQLLKEAAFI AKKADAMLPK
FFGKLPRTPY GIQEVPAEIA PKYTTGRYSG ASGDDQPGYY WVNTYALDKR PLYELEALTL
HEAVPGHHLQ ISLNKELTSL PNFRRYSYIS AFGEGWGLYS EYLGLEGGFY QDPYSNFGRL
TYEMWRAARL VVDTGMHAKG WTRQQAIDYM AGNTALSLHN VTTEIDRYIS WPGQALSYKI
GELTIKRLRA KAEQALGEKF DIRAFHDAVL ANGSVPMALL EQQIDDFIAA QAAR