Gene Shew_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3721 
Symbol 
ID4921078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4427555 
End bp4428550 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content55% 
IMG OID640165343 
Productadenosine deaminase 
Protein accessionYP_001095846 
Protein GI127514649 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.723869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATA CATCCATTCC GTTGGTGGAT CTGCATCGTC ATCTTGATGG TAACGTCAGG 
GTGGAAACGA TTTGGGACCT GGGCCACCAA CACAATATTG CTTTACCTGC CGATACCTTG
GAAGGTTTGG CGCCTTTCGT TCAAATTCAG GGGAAAGAAT CGAGTCTGGT GGCTTTCCTA
AAGAAGCTCG ACTGGATGGT TGCCGTTCTG GCGGATCTCG ATGCGGTTAA ACGTGTGGCC
TATGAGAACG TCGCCGATGC GGCGATCTCT GGCCTGGATT ACGCCGAGTT GAGATTCAGT
CCTTACTATA TGGCGATGAA CCACAAGTTG CCGATAGAAG GCGTCGTCGA AGCTGTTATC
GACGGTGTTA AGGCGGGTCT CAAGGACTAT GAGGTGAAGA TCAACCTGAT TGGCATCATG
TCTCGCTCTT TCGGGCAGGA TGCCTGCATG CAGGAGTTAG AGGCCCTGCT TGCCCATAAG
CAGCACCTGG TGGCGATGGA TCTGGCGGGG GATGAGCTAG GCTTCCCTGG CGCCCTGTTT
AACGATCACT TCAAGAAGGT GCGTGACGCA GGGTTAGCTA TCACGGCTCA CGCCGGTGAG
GCTGCTGGCG CCGAGAGTAT GTGGCAGGCA ATACAGGAGC TGGGCGCTAC CCGCATCGGC
CATGGTGTCA ATGCGATACA TGATCCTAAG CTGATGGAGT ATCTGGCTGC CAACAGGATA
GGCATAGAGT CCTGCCCAAC CAGTAACCTG CACACCTCGA CTGTTACCAG TTATCAGGAG
CATCCGCTGC GTACCTTCAT GGAGGCGGGC GTGTTGATTG GTCTCAACAC AGACGATCCG
GGCGTGAGTG CCATCGACAT CAAGCACGAG TACCGCACCG TGAAGCAGGA GATGGGCTTT
AGCGACGCCG AGCTGGCACA GCTGCAGCGC AACGGCGTGG AGATGGCCTT TATCTCCGAC
AGCGAGCGTA AGGCGCTCTA TGCCGCCAAG GCCTAA
 
Protein sequence
MIDTSIPLVD LHRHLDGNVR VETIWDLGHQ HNIALPADTL EGLAPFVQIQ GKESSLVAFL 
KKLDWMVAVL ADLDAVKRVA YENVADAAIS GLDYAELRFS PYYMAMNHKL PIEGVVEAVI
DGVKAGLKDY EVKINLIGIM SRSFGQDACM QELEALLAHK QHLVAMDLAG DELGFPGALF
NDHFKKVRDA GLAITAHAGE AAGAESMWQA IQELGATRIG HGVNAIHDPK LMEYLAANRI
GIESCPTSNL HTSTVTSYQE HPLRTFMEAG VLIGLNTDDP GVSAIDIKHE YRTVKQEMGF
SDAELAQLQR NGVEMAFISD SERKALYAAK A