| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3719 |
|---|
| Symbol | |
|---|
| ID | 4921076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4425483 |
|---|
| End bp | 4425950 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640165341 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095844 |
|---|
| Protein GI | 127514647 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.144984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACGA CACTCCTCAT CCTAGGCGCC ATCATCATCT TAGGCCTGGC CGCCTATGCC
GCCAACCTGT TACTCAAGCT GAAACAGCAA ACCGCACGAC AAAAAGCGCA ACGCGAAGCC
CAACAAGCCG CGGCTGACGC CAAGGAGCTG GAACTGCTCG GCAACATTCA CTATATCGCC
GCCGCCATGC TCGAAGAGCG CTGTGAACTG TCAGAGGGCG TGATGCGTAT CGGTAAGCTG
TTCAGTATTC TCGGCCACAC AGAGCAGGTG AAACACCAGT ATCCGGCGCT CTTTAAGCAT
TATGAGATCA TCGAGTCCCA CCCTATCATG GAGCAGCGCA AGGCGTTGGC CAAGCAGCAG
CGCATGAAGC TAGACTTAGA GAGAATGAAG TCAGAATCGG TCTTGGAAGC CGAGATCATG
GCCGAGGTGG CCCTGCTGGC CAAAGCCTAT GCCCACCTCA GCCACTGA
|
|---|
| Protein sequence | MTTTLLILGA IIILGLAAYA ANLLLKLKQQ TARQKAQREA QQAAADAKEL ELLGNIHYIA
AAMLEERCEL SEGVMRIGKL FSILGHTEQV KHQYPALFKH YEIIESHPIM EQRKALAKQQ
RMKLDLERMK SESVLEAEIM AEVALLAKAY AHLSH
|
|---|
| |