Gene Shew_3717 details

Gene Information

• Locus tag: Shew_3717
• ID: 4921074
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella loihica PV-4
• Kingdom: Bacteria
• Replicon accession: NC_009092
• Strand: +
• Start bp: 4424140
• End bp: 4424808
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640165339
• Product: hypothetical protein
• Protein accession: YP_001095842
• Protein GI: 127514645

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00803491
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGAAGAT GCCCCCTGTG CACCAGCGAA GAGACCGCCC CCTTCTATCA AGATAGAAAA 
CGCTGCATCT ATCGCTGTAA GCGCTGCATG CTGCTGTTTG CCGATGCCAA CTCTCATCTG 
CCGCCCAGCG CCGAGGTAAA ACGCTACCGC TCGGCCAATA GTAAAGACAA GCCGCTGCAA 
CAATTCCTGT CGAGCCTGAT CACTCAGTGT GAGCAGCAGG TTCAGGGCCC ACTGCTAGGA 
CTCAACTTCG GCCGACTGCT AAACCCACAG GCGATAGACG CCATCAAGGC CCGAGGCCAT 
CAGCTCAACC AGTATGATCC ACACTTCGCC CCGGATCATA CCCTGCTAAG ACTCGAATAC 
GACTTCATCT GTTGTTATCG CGTCTTCGAG CACTTTCGCT TTCCTGGAAA AGAGTGGCAG 
CTGCTGTGTT CCCTGCTTAA ACCCGGCGGC TGGATGGCGA TCAGTACCCA ACTGCTCACC 
GAGCTTCAGG GCTTTCCCAA ATGGCACCAC AAAAACAATC TGACCCATGT CAGCTTTTAT 
CAGCAAGCCA CCTTCCAATA TTTGGCAAGC CAGGCCGAGT TTAGGCTATT ATTCGCCTCG 
AAAGATCTCA TTTTGGTGCA AAAACCAACA GGATCTGGTA TAACACGCGA CCCAAGTTCA 
CTTATCTAA 

 

Protein sequence

MRRCPLCTSE ETAPFYQDRK RCIYRCKRCM LLFADANSHL PPSAEVKRYR SANSKDKPLQ 
QFLSSLITQC EQQVQGPLLG LNFGRLLNPQ AIDAIKARGH QLNQYDPHFA PDHTLLRLEY 
DFICCYRVFE HFRFPGKEWQ LLCSLLKPGG WMAISTQLLT ELQGFPKWHH KNNLTHVSFY 
QQATFQYLAS QAEFRLLFAS KDLILVQKPT GSGITRDPSS LI