Gene Shew_3691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3691 
Symbol 
ID4921615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4395002 
End bp4396507 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content56% 
IMG OID640165313 
Producthypothetical protein 
Protein accessionYP_001095816 
Protein GI127514619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA AAACTCGCGC TTATGTTGTT GGAGGCGTCG CGGCCTTAGG TCTGATGATC 
ACCTCCTTAG CCCACGCGGC CCCTTGGGTC GATGTTTCCG ATATCTATCT CAGAGCCGAC
ATTCAGGCCC TCGCCGATGC CGGAGTGATC ACTGTGCCCG TCAATACCTA TCCTCTGATG
TGGTCGGGTA TTGGGAGCGA TCTGAGTAAG GTGGAACCCT CAGTGCTCTC GCCGGGTCTC
GCCACGGCGT TTGCCCGGGT GAACTTCTAC TACCGCAATG CGGTCGAGAA TCGTGGTAAC
AGCCGCATCA AGCTGGCCGG TGGCAGCGAC CCGGCGCGCT TCCAGCATTT CGGTTCCGAC
TATCGTGAGA AGGCTGAGGT GCAGGCGTCT CACGAGTATC TGGGTGACAG ATTTGCCTTC
AAAGTCGCGG CATCGGCCCA CTATGATCCC ATGGATGAGA AAGAAATTCG CCTGGATGAC
TCTTATTTTG CCGTTGCCCT GGGTAACTGG ATGGTGACGG CCGGCGCCGT GGATCAATGG
TGGGGACCGG GATTCGATAC CGCCCTGCAT CGCTCCAACA ATGCCCGTCC GCTGCCTAGC
CTGATGCTGA GCCGCAACAA TGCGGCGGCG TTCGAGACGC CCTGGCTCTC CTGGATTGGC
CCCTGGACAC TGACAACCGG CATCAGCTAT CTGGAAGAGG AGCGCGCCGT CGCCAATCCA
TTGCTGTGGA ACTTCCGCGG CACCATACGC CCCTTCAGAC AGTTAGAGAT GGGCATCTCC
TGGACCACAA TGTTCTGCGG TGAGGGCGAG GAGTGCGGCC TATCGACCCT GTTCGATGCC
ATCGCCGGTA ATACCACCTG TGTGAACGGT GAGGCCAGCT GTGACCCTGC GCTGCAATCT
AAGATAGGCA ACCAGATGGC GGGCTTCGAT ATTCGTTACG CCGATACCTG GTTCGATATC
CCGGTAGGCC TCTACTTAGA GCGTACCTGT GAAGACTCGA GCGGCCCTAT GCCCTGGGAT
CTGGCCGATT GCGCCAAGCT GTTCGGCGCC GATACCCGTT TCGAGTTCGA CTCTCAGCAG
TATAAGCTCT TCTTCGAGTA TTCAGATACC ATGGTGGCCT GCGGCGAAAA CCAGAATGCC
TTCAACTGCT TCTATGAGCA CAGCACCTAC AAGAGTGGCT CGCGCTACTA TGGCCGCTCA
CTCGGCAGCA CCTATGATAG CGATGCCAAC GTCTATGTGT TGGGGCTTAT CGGTCAGTTT
GCCAATAGCC ATGGCTTCAC CTCACTGCTG CGTTTCGCTC AGTTAAACAA GGATGGTAAA
ACGGTCAATA ATGGTTGGGC ACCAAAGCCA CGTAAGGAAG ATCTGTTGAT GTTGGAACTC
AGCTATCGTC TGCCAATCTG GAAGGGGATG ATGAGCCTGG GCGGCACTGT GTCTCAGTCA
GAATTCGAGG CCGATGACAA GGATACCAAT GCGACCCTGT TCGGCAGCTA TGAGTATCGC
TTCTAA
 
Protein sequence
MMEKTRAYVV GGVAALGLMI TSLAHAAPWV DVSDIYLRAD IQALADAGVI TVPVNTYPLM 
WSGIGSDLSK VEPSVLSPGL ATAFARVNFY YRNAVENRGN SRIKLAGGSD PARFQHFGSD
YREKAEVQAS HEYLGDRFAF KVAASAHYDP MDEKEIRLDD SYFAVALGNW MVTAGAVDQW
WGPGFDTALH RSNNARPLPS LMLSRNNAAA FETPWLSWIG PWTLTTGISY LEEERAVANP
LLWNFRGTIR PFRQLEMGIS WTTMFCGEGE ECGLSTLFDA IAGNTTCVNG EASCDPALQS
KIGNQMAGFD IRYADTWFDI PVGLYLERTC EDSSGPMPWD LADCAKLFGA DTRFEFDSQQ
YKLFFEYSDT MVACGENQNA FNCFYEHSTY KSGSRYYGRS LGSTYDSDAN VYVLGLIGQF
ANSHGFTSLL RFAQLNKDGK TVNNGWAPKP RKEDLLMLEL SYRLPIWKGM MSLGGTVSQS
EFEADDKDTN ATLFGSYEYR F