| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3681 |
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| Symbol | |
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| ID | 4921765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4384022 |
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| End bp | 4386163 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165303 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001095806 |
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| Protein GI | 127514609 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0360535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTTT TCTCGCGTCT CTTTGGTGTC AACTGGCAGC AGCTGCAGGC CAAGGTGCGT
TATCGCATCT TGATCCTTAC CCTGCTGCCC ATCTTGCTGA CCTTGGTGAG CCTGGTGTTC
ATCACCATCT ACTGGAACAT CAGCTACACG GGCAAACAGC TCTTCATGAA GGTGAAGGCC
GACCTTACCG TTGCCAGCAA CACACTGATC TCTGTGCAGG AGAAGCAGGA AAATCAGCTC
GAGCTGGTGC GCGCCTCCTG GGAGTTTCAA AACGAATTTC GCGATCTCGA TACCGACAGC
AAGGCCGCCA GAACTCAGCT GGCCGAGCTG CTCAAGCAAA AGCAGGCCGA GCTCGACCTG
GACTTCCTCA GGCTGATCAG CGTCTCCGAG GCGGCCCAGG ACCCGGATCT TAGGGTGATG
CTGCCCAAGA TACAGGACAA TCAGCCCTTC TCGGGTTTAA TGGTGTTGCA GCCCCAGCGT
CTGGCCCGTT TGGCACCCAA CCTGGAGCAG GAGGCGGTGA TCACCCTGGT GGACACCCCA
AGATCCCAGA AGCCGAGCAA GGATGTGGAG AAGCGCGGCA TGCTCAGTCG CAGCCTGCTG
CCGATCCTCG GCAGCGATGG CACAGTGGGC TGGTATCTGG ACGGCGGCAT CTTGCTTAAT
CGCGACATTC GCATCGTGGA CCATATTCGT GACCTGGTTT ATGACAAGGG CACGCTGCCA
GAGCGCTCCA TCGGCACGGT AACCATCTTC CTCGATAACA CACGCATCAG CACTAACGTG
CCGCTGAACT TCTTCCCCCA GGACAGCGAG AAGCGCGGCC GAGCGCTGGG TAGTCTGGTG
TCGGAAGAGG TGCGTCAGAA GGTGTTAGTG CAGGGGCTGC TGTGGGTCGA CCGCGCCTTC
GTCTACAACG ACTGGTTTAT CTCCGCCTAT GCGCCGCTCA AGGATATTCG CGGTGAGCGT
ATTGGCATGA TCTACACGGG ATTTTCCGAA TCTCCCTTTA TTCATAACTA TCTGCTGAAC
ATCATAGAGC TGGGCACTAT CCTCATGTTG GTGCTGCTGG TCTCTGGCCT GCTGGTCTAC
CGTGGCGCCT ACAGCCTGCT ACAGCCGATC GAGCGTATTC ACCATGTGGT GAAGGCGGTG
CAGTCGGGGC GTAACCTGAG AATCGGTTCT CTGGGGCTGG AGCGCGACAA CGAGCTGGCG
AATCTGGCCG AGCAGTTCGA CCGCATGCTG GACCTGTTGC AGCGACGCAA CTCGCAGATC
CAGGCGGCGG CAGAGCAGCT TGAGGTCAAG GTCGAGGAGC GTACCCGCAG TCTGCAGGAG
AAGACAGAGG AGCTGCAGCG TAACGTTGCC CTGCTGAACG AGACTCGCCA GCAGCTGGTG
ACCAACGAGA AGTTGACCGC CCTGGGTGAG TTGACGGCAG GTATCGCCCA TGAGATCAAC
AATCCGACGG CGGTTATCCT GGGTAACATG GAGCTGCTGA AGTCTGAGCT GGGCGACAAG
GCCGAGGATG TTGAGGAAGA GATTGATATC GTCATCGAGC AGGTGGGGCG TATCAGCACC
ATCATTCGCA GCCTGTTGCA ATACAGTCGT CCCGGCGAAT TTAACGCGCC GCTGGAGATG
CATCAGCTCA CGCCTATCGT CGAGGAGATG GCCATTCTGG TGCGTCACTC CATCAAGAAG
CAGGAGGTGG TGCTGATCCA GGATCTCAAC GCCAGTTATC CTATCGAGGT CAATCGTCCT
CAGCTATTGC AGGTGCTGAT CAACCTGGTG GTCAACGCCG CCCATGCCAT GGATGGACAG
GGACGCATCT GGATCCGCAC CTACGACTGG GTCCAGGGCG GTGAGCCCAT AGGGGTCAAG
ATAGAGGTGG AAGATGAGGG TAAGGGGATC CCCGAGGAGC AACTGGGGCG CATCTTCGAT
CCTTTCTATA CCACGCGTCA GGACGGTACC GGATTGGGGC TGTCGCTAAG CTACGGCATC
ATCAAGCGGA TCGGCGGCAC CATAGAGGTC AGCTCCACGG TCGGCAAGGG CACCCTGTTT
ACCATAGGCC TGTACCATAA GGCGATCGAC GATCAGTTCA ATCCGCCCTA CGAGGGGCTG
CATTTCTCAA GTGCGCTAGA TAAGAAGGCG CGAGAGGCCT AG
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| Protein sequence | MSFFSRLFGV NWQQLQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA
DLTVASNTLI SVQEKQENQL ELVRASWEFQ NEFRDLDTDS KAARTQLAEL LKQKQAELDL
DFLRLISVSE AAQDPDLRVM LPKIQDNQPF SGLMVLQPQR LARLAPNLEQ EAVITLVDTP
RSQKPSKDVE KRGMLSRSLL PILGSDGTVG WYLDGGILLN RDIRIVDHIR DLVYDKGTLP
ERSIGTVTIF LDNTRISTNV PLNFFPQDSE KRGRALGSLV SEEVRQKVLV QGLLWVDRAF
VYNDWFISAY APLKDIRGER IGMIYTGFSE SPFIHNYLLN IIELGTILML VLLVSGLLVY
RGAYSLLQPI ERIHHVVKAV QSGRNLRIGS LGLERDNELA NLAEQFDRML DLLQRRNSQI
QAAAEQLEVK VEERTRSLQE KTEELQRNVA LLNETRQQLV TNEKLTALGE LTAGIAHEIN
NPTAVILGNM ELLKSELGDK AEDVEEEIDI VIEQVGRIST IIRSLLQYSR PGEFNAPLEM
HQLTPIVEEM AILVRHSIKK QEVVLIQDLN ASYPIEVNRP QLLQVLINLV VNAAHAMDGQ
GRIWIRTYDW VQGGEPIGVK IEVEDEGKGI PEEQLGRIFD PFYTTRQDGT GLGLSLSYGI
IKRIGGTIEV SSTVGKGTLF TIGLYHKAID DQFNPPYEGL HFSSALDKKA REA
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