Gene Shew_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3680 
Symbol 
ID4921764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4383298 
End bp4383759 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content54% 
IMG OID640165302 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001095805 
Protein GI127514608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000363939 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCA CAAGTATCGA GCATCACACC CAACTGAGCG ATGAGCTCAT CGACACCCTG 
ATTGGCCTGA GCCAGGAGGT GCCCGAATTC GACGGCCGTC ATCGTGCTGA AGACTATCAA
GCGCGCCTGG GCGGCAAGAC GTTTCTGGTG CAGCTGATCC GCATTGAGGG CGAGTTGGCG
GGCTACAAGA TAGGCTATGG CGAGACCAAT GGTGAGTTCT ATAGCTGGCT GGGCGCTATT
CTGCCTGAGT TTCGTCAGCT GGGGCTGGCC AAGGCATTGA TGCAAGATCA GGAAAGCTGG
GCCAAGACAC AGGGCTTCAA CACCCTGGCG GTGAAGACCT ATAACCGCTT CGCCAACATG
TTGCAGCTGC TGATCCAGCA GGGCTACAAG ATCGCCGGAT TGGAAAATAC CGCGGCCAAT
ATCGATGATA ACAAGTTGGT TTTAAACAAG TTACTGAGCT AG
 
Protein sequence
MYTTSIEHHT QLSDELIDTL IGLSQEVPEF DGRHRAEDYQ ARLGGKTFLV QLIRIEGELA 
GYKIGYGETN GEFYSWLGAI LPEFRQLGLA KALMQDQESW AKTQGFNTLA VKTYNRFANM
LQLLIQQGYK IAGLENTAAN IDDNKLVLNK LLS