| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3677 |
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| Symbol | |
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| ID | 4921761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4380196 |
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| End bp | 4381554 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165299 |
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| Product | isochorismate synthase |
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| Protein accession | YP_001095802 |
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| Protein GI | 127514605 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTTT CCTCGCTGCC ACAGGCCATA CAATCCTTAT CCCGCAAACT CGAAAAACTC
GACATACACC CCCAGGGTGA GCCGATCATT CAGTTGTCGG TGACGGCCTG TGTAATGCCG
ATGATCGCCT GGATCGCCAG CCAACCTTGT TATCCCAGGA TCTACTGGCA TGGCCGCGAC
ACCCAGGAAG AGGTCGCCGC TCTGGGGTGC TGTAAAGATT TCATCTTCGA AGATGCGGTA
GACGACAACC AGCTTTCCCA GGCCTATCAG ACCCAGAGGT CACTCTCGAC CAACCAGGAG
ATACGCTACT ACGGCGGCGT CGCCTTCGAT CGTCATACCG AGTGCTGGCC CGAGTATGGC
CGCGCCCATT TCATCCTGCC CAGGGTCGAG CTGAGACGCA GTGGCGATGA ATACAAGCTG
CTGGTCAACC TCAATGTCGA ATCCGGCGAT ATCGAGCAGG AGCGTAACCT GGCGCTGCAG
GCCCTCGCCG CTTTGGTACC ACCCAAGCCG CTGGCGCCAC CGAACAAGAT CCAGCTGCTG
AGTCGCAGCG ATCGTCCCAA CAAGCTGCGC TGGCACGAGC TGGTCAACCA GGTCACCCAT
GACAGGTTTA TTCAAGATAC GCCTAAGGTG GTGCTGTCAC GTCTGACGCA ACTTGAGGTG
AACGAGAAGG TGGATCCCTG GATGCTGCTG GCCAGCTGGC AGGGTCGCAA CCAGAACAGT
TTTCAATTTG GCTTTCAGTT CAGCCCGGAG AGCGCCTTTA TCTCCTGCAC GCCGGAGCGT
CTCTACCGAC GTCGCCAGCG CGAGGTATTT ACCGAGGCCT TAGCGGGCAC CACCACACGC
GGACTCAACG AGGCCGAAGA TGCCATGCTG GCGCAGCAGT TGCTGGACGA CACCAAGAAC
AGCCATGAGA ACCAGCTGGT GCGCGAGCAT ATCGTCGATG CCCTGACCCC ACTGAGCAAC
TATGTGGGCG CCGACGAGCT GGCCAAGGTG TTTAAGCTGA GCCACATCCA GCATCTACAC
AGAGCCATTC GCGCCGAACT CAAGCCTGGG GTGAACGATT TTCAGATCCT GCAGGCCCTG
CACCCCACCC CTGCCGTGGG CGGCCTGCCA AAGGCTTCAG CCATCAACTT TATTCGCCAG
CGAGAAGGCT ACACCCGTGG CTGGTATGCC GGTGCCTGTG GCTACTTCAA CAAGTATGAG
AGCGAGTTTG CGGTGGCGAT TCGTAGTGCG CTGATCGAAC CCGGACGCAT CAACTTGTTT
GCCGGTGCGG GGATCGTCTC GGGCTCTGAG GCCGAGGCGG AATGGAACGA GCTGGAGAAT
AAGCTCAAGA CCATAATGTC GATCCTGACA GAGGTCTAG
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| Protein sequence | MSVSSLPQAI QSLSRKLEKL DIHPQGEPII QLSVTACVMP MIAWIASQPC YPRIYWHGRD
TQEEVAALGC CKDFIFEDAV DDNQLSQAYQ TQRSLSTNQE IRYYGGVAFD RHTECWPEYG
RAHFILPRVE LRRSGDEYKL LVNLNVESGD IEQERNLALQ ALAALVPPKP LAPPNKIQLL
SRSDRPNKLR WHELVNQVTH DRFIQDTPKV VLSRLTQLEV NEKVDPWMLL ASWQGRNQNS
FQFGFQFSPE SAFISCTPER LYRRRQREVF TEALAGTTTR GLNEAEDAML AQQLLDDTKN
SHENQLVREH IVDALTPLSN YVGADELAKV FKLSHIQHLH RAIRAELKPG VNDFQILQAL
HPTPAVGGLP KASAINFIRQ REGYTRGWYA GACGYFNKYE SEFAVAIRSA LIEPGRINLF
AGAGIVSGSE AEAEWNELEN KLKTIMSILT EV
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