| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3676 |
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| Symbol | |
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| ID | 4921760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4377598 |
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| End bp | 4379805 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165298 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001095801 |
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| Protein GI | 127514604 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA AACCAATCAG TCTCAAATTA TCACTCGTGG CAGCCGCGGT TGCCGCCAGT
CCTCTGGTCA TGGCCGAGGA AGTCAAACAC GAGCCCATTT TAGATGTGGC CGAAGTCATA
GTGGTGACCG GCGAGAAGCC GACGCCGCTG CAACAGACCA CGAGTAGCTG GACCATCAGT
GCCGATGAAA TTCAGGCCAT GGGTGCCCAG AGCCTGGACG AGGTACTGAA GAATGCCCCT
GGCGTCTATG TGCGTACCGG TGGCCAGGGC ACGCCCAGGG TCGATGTGCG CGGCTTTAAG
GCCAGACACG TCATCTATCT GATCAACGGC GTGCCGGCCA ATGGCGCCGA AGATGGTCAG
TTCGATCCTA GCGTGGTGCC TGCCAGCCAG ATCGCCTCGG TCACCGTCTC CATGGGCCCA
ACCTCTGTGC TCTATGGTCC GGGCGGCGCC GGCGGCGTGA TCAACATCCG CACTAAACAG
GGCGCCGATG TGCCCGGCTT CTCCGGCCAT CTAGAGGGCG GCGAAAACGA TACCTTCAAC
GGCGACGTCA CAGTGGCGGG CTCGGGCGAA CGCTGGCAGG GGCTGGTATC GCTGTCGCGT
CAGCAGACCG ATGGCTGGCC TGTGTCTGGC GATCAGCCGG ATACCGAGGT GCAGCAGGGC
GATACCCGTT TCAACAGCGA CAAGACGATC AACAACCTGT TTGCCCAGGG CAGCTACTGG
CTGTCGGACA ATACCCAGCT GATGGCAAAC CTCAGCCTGC GTAGCGGCGA GTGGGGCAAG
CCCGCCGTCG ATGGCACAAC CTCTGGTAAG GCCAAATTTG AACGCGTCGA CGACTATGAT
GCCCATACGG TGCAACTGGG TCTGGCCCAT AGATTCAACG AGCTGCTGAC CCTGAGGGGC
TTCATCTACC AGAATCAGTC TGACGTGCTG GAAAACCGTT ATCTGGATGA CAGTTTCGCC
GGCCTGCAGC AGAGCCTGGA CGGCCGCTCT GTGGTCAGCG GCGGTAACCT GCAGCTGATC
GCCGACTTCG ATAAGGGTCA CCTGCTGACC GGCGCCCTGA TCGCCGAGCA CCAGAGCTGG
GAGTCAGAGA GTAATCAGAT AGATACCGGC AGCACAGGCA CAGGAAGTGG CACCGGCAGT
GGTTCAGGTA GTGGTTTAGG ATCTGGCTCC GGCAGCGGAT CTGGAACAGG AACTGGAGGT
GGTTCGGGCT CAGGTACTGG GGGCGGATCA GGCTCGGGAT CGGGAACCGG TAGCGGTTCG
GGTTCAGGCA GTGGAACAGG GTCGGGTAGC GGATCTGGCA CAGGTGGCGG TTCTGGCTCA
GGAACCGGCG GTGGCACGGG CGGTGGTAAT GGCTCTGGCG GCGCCGAGTC ATTCGACGAT
TCGTCCTGGC TCTACACCCT GGCGGCGGAA TATCAGTATC AACAGGATAG TATCGGTGCC
AGCCTGGGCG GCGCCCTACA CGAGCAGCAA CGTGTGCGTG AAGATGAGTC CGACTACTCG
GCGCAGGCCT CAGCCTACTG GCAGGCCGCC GAAGCGACTC GCCTCAATCT GGGTGTGGCC
CGTAAGGTGC GTTTCCCATC GATGCGCAAC CTCTACTCAC TCTCGTCGGG TAACCAAGAT
CTGCAATCTG AGACCTCTAA ACACCTGGAG CTGAGTCTGG CACAGGGGCT GGGTAGCAAC
ACAGATCTGA GCCTGGCGGC CTACTACACG GATGCGGACA ACTATATCGC CAAGGATGTC
GATGGCATCT ATCAGAACAT GGGCCGCTAT CAGTTCAAGG GGGTCGACTT CCTGGTACGC
GATCAGAGCA TCGATAACCT GTCGCTGAGC TTCGGCTACA GCTTCCTCGA TAGTGAAGAC
AAGGATGCGG CGCCGGGACT GGATACCTTA GAGTACCGTC CGCGTCATAA ATTCAGGCTG
CAGGCGGATT ACGAGTTTAG CTTTGCGACC CGCATCAACC TGAATATCGA GCACATCATG
GGCCAGGTGT TCCACACCGA AGAGAAGGTG GCCGGTCAGA AACAGCTGGT GGAGAAGTCG
CTGGATGACT ACACACTGGT GGATCTCAAG CTGAGCCAGC CTATCGCGGG TGACGCCCTG
TCTGTCTACC TCAGAGCCAC TAACCTGCTC GATGAGCGTT ACTATCAGAG CGAGGGGCTG
CCTCAGGCGG GTCGTCAGTT GTTCCTGGGC GTGAACTGGC AGCTATAG
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| Protein sequence | MKNKPISLKL SLVAAAVAAS PLVMAEEVKH EPILDVAEVI VVTGEKPTPL QQTTSSWTIS
ADEIQAMGAQ SLDEVLKNAP GVYVRTGGQG TPRVDVRGFK ARHVIYLING VPANGAEDGQ
FDPSVVPASQ IASVTVSMGP TSVLYGPGGA GGVINIRTKQ GADVPGFSGH LEGGENDTFN
GDVTVAGSGE RWQGLVSLSR QQTDGWPVSG DQPDTEVQQG DTRFNSDKTI NNLFAQGSYW
LSDNTQLMAN LSLRSGEWGK PAVDGTTSGK AKFERVDDYD AHTVQLGLAH RFNELLTLRG
FIYQNQSDVL ENRYLDDSFA GLQQSLDGRS VVSGGNLQLI ADFDKGHLLT GALIAEHQSW
ESESNQIDTG STGTGSGTGS GSGSGLGSGS GSGSGTGTGG GSGSGTGGGS GSGSGTGSGS
GSGSGTGSGS GSGTGGGSGS GTGGGTGGGN GSGGAESFDD SSWLYTLAAE YQYQQDSIGA
SLGGALHEQQ RVREDESDYS AQASAYWQAA EATRLNLGVA RKVRFPSMRN LYSLSSGNQD
LQSETSKHLE LSLAQGLGSN TDLSLAAYYT DADNYIAKDV DGIYQNMGRY QFKGVDFLVR
DQSIDNLSLS FGYSFLDSED KDAAPGLDTL EYRPRHKFRL QADYEFSFAT RINLNIEHIM
GQVFHTEEKV AGQKQLVEKS LDDYTLVDLK LSQPIAGDAL SVYLRATNLL DERYYQSEGL
PQAGRQLFLG VNWQL
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