Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3674 |
Symbol | |
ID | 4921758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4375563 |
End bp | 4376216 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640165296 |
Product | cobalt transport protein |
Protein accession | YP_001095799 |
Protein GI | 127514602 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCGCGC CTGGAGTGCG CCGTGCTAAA CGCCACTTCG CGGTCAACGA TACCCGCTGG TGCGCGCTCG CCATCCTTCT CGCCCTGGGG CTCTCCAGTT GCGCCTTCCT GTTGCCCCAG TCATGGCTGC ATTACCTGGG CCTGGCGAAC TTGCTGTTGC TGATACAGGG TCGTTACCTG GGCGGGCGAC TCAGGGGGCT GTTGGTGATC TTCACCAGTC AGTTGGCGAT CACTAGCCTG CTCTATCTGT TGCTGCACGG ACTCGAGCGT CTACCCGAGG GGATTATCGC CGTGTGCCGC ATCTTGATGG CCATGATCCC CGGCTGGTGG CTGTCGGTGG CCTGCTCGCC CCAGCGAATC GGCGAGGTGC TCAGCTTCTG TCTGCCCCAC AAGTGGGCCT TCGTGCTGGC CGCCTGCTTC GGCATCTTGC CTTACCTAGG GCAGGAGACG CGGGAGATCT ATCAGATGCA GGTGATGCGC GGCGCCAACA TTCGCCTCAA GTCGTTGTGG CGTCCCAAGC ATTGGCGCGA GCTGATCTAC TGCGTGCTCT ATCCGCTGCT GATCCAGCTG TTAAAACTAT CCAAGCAGAT GGCCACAGCG GCCAGGCTGC GCCAGTTTGG TCGTCATCCC AAGCCGACCC ACTGGCCCTA TTAG
|
Protein sequence | MRAPGVRRAK RHFAVNDTRW CALAILLALG LSSCAFLLPQ SWLHYLGLAN LLLLIQGRYL GGRLRGLLVI FTSQLAITSL LYLLLHGLER LPEGIIAVCR ILMAMIPGWW LSVACSPQRI GEVLSFCLPH KWAFVLAACF GILPYLGQET REIYQMQVMR GANIRLKSLW RPKHWRELIY CVLYPLLIQL LKLSKQMATA ARLRQFGRHP KPTHWPY
|
| |