Gene Shew_3673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3673 
Symbol 
ID4921757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4375009 
End bp4375548 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content59% 
IMG OID640165295 
Producthypothetical protein 
Protein accessionYP_001095798 
Protein GI127514601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA AAGGATTCAA CCTAAATGAC GCCCTGTTTA TCGGCTTCTG TGCCACCCTG 
CTGGTGGCGC TGAAGGGGAT GCTGAGGCTA AAACTAGGGC TGTCGGGACA TTCCATGTTC
CTGATGAGCT TCTTCTATTT AATTTGCTAT GGCGCCGTGG GTAAGCGCGG TGCCATCAGC
CTGTGTGGCC TGTTGGCGGG CATGATGGCC ATGACCCTGG GCGTCGGCAA GGGCGGTCCC
TTCCTGCTGG TGAAGTTTGG CCTGCCGGCT ATCGCCATGG ATATCTGCCT GCTGCTACTG
CCCAGCCTGC TGGCGCTCAA GTGGCGCTGC ATCATACTGG CGCTGGTGGG CACCCTGGCC
TGGGCCAGCA AGGGGCTTAT CGAGGGGCTG CTGGCGGGGC TGAGCACCCA AGTGGTGGCG
CTACAGTTCG GTAAGAGCCT GTTGTTTGGC AGCTTCTTCG CCCTGTTGGC GGCCATGTTG
GTGCCGCCCG TACTGGAGCG ACTGCGTAGC CACGACCTGA TTGATAGAGA GGAGATATAA
 
Protein sequence
MNNKGFNLND ALFIGFCATL LVALKGMLRL KLGLSGHSMF LMSFFYLICY GAVGKRGAIS 
LCGLLAGMMA MTLGVGKGGP FLLVKFGLPA IAMDICLLLL PSLLALKWRC IILALVGTLA
WASKGLIEGL LAGLSTQVVA LQFGKSLLFG SFFALLAAML VPPVLERLRS HDLIDREEI