| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3664 |
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| Symbol | |
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| ID | 4921886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4366486 |
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| End bp | 4367391 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165286 |
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| Product | alpha-L-glutamate ligase |
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| Protein accession | YP_001095789 |
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| Protein GI | 127514592 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.124246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATTG CAATCTTGTC TCGCAATGAA AACTTATACT CCACCCAACG CCTGAAAGAA
GCCGGCGAAG CTCGCGGCCA CGAGGTGGAC ATCATAGATA CACTGCACTG CTACATGGAT
ATCACCAGCA GCAACCCAAC CGTGCGTTAC ATGGGTAAGG TACTGCCTAA GTATGATGCC
GTGATCCCTC GCATCGGCTC GTCGATCACC TTCTACGGTA CGGCCGTGGT GCGCCAGTTT
GAGATGATGG GCACCTTCTG TGTCAACGAG TCTGTGGCCA TCAGCCGTTC TCGCGATAAG
CTGAGATCCC TGCAGCTGCT GTCACGCAAG GGCATCGGCC TGCCACGTAC CGGATTTGCC
AGCAAGCCCG ACAAGATCCA GGATTTGATC AAGAACGTGG GCGGCGCGCC CCTGGTGATC
AAGCTGCTGG AAGGCACCCA GGGCATAGGC GTGGTCTTGG CCGAAACCAA TAAGGCGGCC
GAGAGCGTGA TCGAGGCCTT CATGGGTCTC AAGGCCAACA TTCTGGTGCA GGAGTTCATC
AAGGAAGCGG GCGGCGCCGA TATCCGCTGC TTCGTGGTGG GTGATAAGGT AGTGGCGGCC
ATGAAGCGTC AGGCGGCCGA AGGCGAATTT CGCTCTAACC TGCACCGTGG TGGTGTGGCC
CAGCTGGTGC GCCTCTCTAA GGATGAGCGT GCGACGGCCC TCAACGCCGC CAAGGCGATG
GGGCTAAACC TCTGTGGTGT GGATATCTTG CAATCGAACA ACGGCCCAGT GGTGATGGAA
GTGAACTCCT CGCCCGGACT GGAAGGGATA GAACAGGCGA CCGGTAAGGA TGTGGCCGGG
CTGATCTATG AATTTATTGA GAAGAAGGCG AAACCCAACG CCAACAGAAC TCGCGGAAAA
GGCTAA
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| Protein sequence | MRIAILSRNE NLYSTQRLKE AGEARGHEVD IIDTLHCYMD ITSSNPTVRY MGKVLPKYDA
VIPRIGSSIT FYGTAVVRQF EMMGTFCVNE SVAISRSRDK LRSLQLLSRK GIGLPRTGFA
SKPDKIQDLI KNVGGAPLVI KLLEGTQGIG VVLAETNKAA ESVIEAFMGL KANILVQEFI
KEAGGADIRC FVVGDKVVAA MKRQAAEGEF RSNLHRGGVA QLVRLSKDER ATALNAAKAM
GLNLCGVDIL QSNNGPVVME VNSSPGLEGI EQATGKDVAG LIYEFIEKKA KPNANRTRGK
G
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