| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3662 |
|---|
| Symbol | |
|---|
| ID | 4921884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4363954 |
|---|
| End bp | 4364625 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640165284 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095787 |
|---|
| Protein GI | 127514590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.217409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.779139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATAGCA GGTTAGTTAA AGCTATAGAA AAACAAAGGA GTAACTCGTA CTGCTTGAGC
CTCTGGAGTA TGTTCATAAG AGAGCGAGAT GGCCACAGGT GCATTATATG TAACTCGAAG
AAGAAACTTT CTGCTCACCA CATAATCCGC AAGAGCTTTT GGAAGCACTT AAAGTTTCAA
ACCGGAAATG GAATTACTTT ATGTCACGTA TGCCATAAAG ATCCACATAC CGGTTTTAAC
GGACGTCCGG ATCTCAGTCA ACCGATGGAT GCACAAGGTG GAGAGAAAAT AGATTTATTT
ACAGGTTATC TGGGTGCTCT GGTTATTGAC TCCTACAGGC GTAACCAGCT TGAAGAGTAT
TTGTATCATT TTAGCGATGG AGCTTTAGAC GCATTCAAGA AGATTCAGGG TATACCAGAA
GCCGCAACAT TCGAAGGACG ACAAATAGAG AAGGCGTATC AAATATGGAA TCAAACCCCA
AGAGGAATGT TTGAAGCAAT ATTAAATTCC GTAGGTGTAA CTATTCCAGA GGATTATGTT
CAAAATGAAG AAGTGACAAT GTATTACTCT GACACTTTGA AAAAGAAAGA TGGTAGTCCT
GCAGATGTAA TGTACTTTCG ATATATCCCT CCAACAGAAT TTAAAGAAAA TCCAGATGAT
ACTCTGGAGT AA
|
|---|
| Protein sequence | MYSRLVKAIE KQRSNSYCLS LWSMFIRERD GHRCIICNSK KKLSAHHIIR KSFWKHLKFQ
TGNGITLCHV CHKDPHTGFN GRPDLSQPMD AQGGEKIDLF TGYLGALVID SYRRNQLEEY
LYHFSDGALD AFKKIQGIPE AATFEGRQIE KAYQIWNQTP RGMFEAILNS VGVTIPEDYV
QNEEVTMYYS DTLKKKDGSP ADVMYFRYIP PTEFKENPDD TLE
|
|---|
| |