| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3654 |
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| Symbol | |
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| ID | 4921876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4354255 |
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| End bp | 4355868 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165276 |
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| Product | AbgT putative transporter |
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| Protein accession | YP_001095779 |
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| Protein GI | 127514582 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCA ACCAAGAAGA TGGTCTGGTG GCCAGTCAGC CCCCAACACC ATCGACGACC
AAGAAGGGCC TTTTCGTCCG CTTTCTCAAC CTGGTCGAAC ACCTGGGTAA CCTCCTGCCC
CATCCCATCA CCCTCTTCGC CCTGTTTTGC GCCGCCGTCA TAGTGATCAG CGGCATCGCC
GGCTATTTCG AACTGACGGT CAACGATCCC CGTCCGATCG GCGCGGCGGG ACGCAGCGAG
GATGGCCTGA TCCATGTGAT CAGCCTGATG AATGCCGAAG GCCTGAGGAT GATAGTCTCC
AACCTGGTGA CCAACTTCAC CGGCTTCACT CCCTTAGGCA CTGTACTGGT TGCCCTCTTG
GGGGTCGGCA TCGCCGATCG CTCCGGCCTG CTATCGGCCG CGATGCGCAC TTTGGTGATG
GGCGCCTCTA AGCGTCTGGT TACCCTCACC ATAGTCTTCG CCGGTATCGT CTCCAACACA
GCCGCCGAGC TGGGCTATGT GGTATTGATC CCTATGGCGG CGCTGATCTT CCACTCCCTC
GGGCGTCATC CCCTGGCGGG TCTGGCGGCG GCCTTCGCCG GTGTCTCCGG CGGCTACAGC
GCCAACCTGC TGTTGGGCAC GGTAGACCCT CTGCTGTCGG GCATCACCGA GGCAGCGGCG
CAGATGATCG ACCCTGACTA TTTAGTGGGC CCAGAGGTCA ACTGGTACTT CATGTTCGCC
TCGACCTTCG TCATCACCAT TCTCGGCGCC CTGGTCACGG AGAAGATCGT CGAGCCCAAG
CTGGGTAAGT ATGATCCCAG CGAGGCCAGC ATAGATCTGC ACAATCAGAA GATGGATGGC
GTCACGCCGC TGGAGATCAA GGGACTGAAG ATGGCTGGCC TCTCCATCTT AGTATTGGGC
GGCATATTGG CGCTCTCTGT GGTGCCGGAA AACGCGCCGC TGCGTCACCC AGAGACGGGG
CTGGTCGCGG GCTCGCCCTT CCTCAAGGGG ATAGTGGCCT TCATCTTCAT CTGTTTCGCC
ATTCCTGGCC TGGTGTACGG CAAGGTGGTG GGCACCATGA AGCGAGATAA GGACGTGATC
GACGCCATGT CCCACAGCAT GAGCACCATG GGCATGTATA TCGTGCTGGT GTTCTTCGCC
TCCCAGTTTG TCGCCTTCTT CAAGTGGACT AACCTGGGCG CGGTGCTGGC GGTAGCAGGG
GCCGATGCCC TCAACGCCAT CGGCCTCACG GGCCCGCTGG TGTTCCTGCT GTTTATCATG
ATGTGCGGCT TCATCAACCT GATGCTGGGC AGCGCCTCGG CCCAGTGGGC GGTGACGGCG
CCTATCTTCG TGCCCATGTT GATGTTGGTG GGATACGCCC CAGAGACGAT TCAGGCCGCC
TATCGTATCG GCGACTCGGT CACCAACCTG ATCACCCCCA TGATGAGCTA CTTCGGCCTG
ATCCTGGCCG TGGCCTCCCA ATACAAGAAG CATCTCGGCA TAGGCACCCT AGTCGCCACC
ATGCTGCCCT ACTCGATCGT CTTCTTCATC GGCTGGACCT GTTTCTTCTT CATCTGGGTG
TTTGCCCTCG GCCTGCCGGT TGGCCCAGGC GCGGCAACCT ACTACACGCC TTAA
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| Protein sequence | MSSNQEDGLV ASQPPTPSTT KKGLFVRFLN LVEHLGNLLP HPITLFALFC AAVIVISGIA
GYFELTVNDP RPIGAAGRSE DGLIHVISLM NAEGLRMIVS NLVTNFTGFT PLGTVLVALL
GVGIADRSGL LSAAMRTLVM GASKRLVTLT IVFAGIVSNT AAELGYVVLI PMAALIFHSL
GRHPLAGLAA AFAGVSGGYS ANLLLGTVDP LLSGITEAAA QMIDPDYLVG PEVNWYFMFA
STFVITILGA LVTEKIVEPK LGKYDPSEAS IDLHNQKMDG VTPLEIKGLK MAGLSILVLG
GILALSVVPE NAPLRHPETG LVAGSPFLKG IVAFIFICFA IPGLVYGKVV GTMKRDKDVI
DAMSHSMSTM GMYIVLVFFA SQFVAFFKWT NLGAVLAVAG ADALNAIGLT GPLVFLLFIM
MCGFINLMLG SASAQWAVTA PIFVPMLMLV GYAPETIQAA YRIGDSVTNL ITPMMSYFGL
ILAVASQYKK HLGIGTLVAT MLPYSIVFFI GWTCFFFIWV FALGLPVGPG AATYYTP
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