Gene Shew_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3641 
Symbol 
ID4922175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4342862 
End bp4343398 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content54% 
IMG OID640165263 
Productredoxin domain-containing protein 
Protein accessionYP_001095766 
Protein GI127514569 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.731441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATTGA ATAAGGCTCA AATTGGGCCA CCTAAGTTTA CTGTTAACCA TAAGGATTTT 
TCCATGATAG CCCAAGGACA ACCATTACCC GCCGCCACCT TAGGTCAGCT CACCGAGAAC
GGCATGGTCA ACCATGATGT GAACGAACTG TTTGCCAACA AGAAGGTGGT GCTGTTTGCC
GTACCCGGCG CCTTTACCCC AACCTGCTCA GAGGCGCATC TGCCCGGCTA TGTAGTACTG
GCGGATCAGT TTAAGGCCAA AGGGGTCGAT ATCATCGCCT GCGTATCGGT TAACGATGCC
TTCGTGATGA AGGCCTGGGG CGAGGCGCAA AATGCTAGCG AGTTGATGAT GTTGGCCGAT
GGCGATGCCA GCTTTACCAA GGCATTGGGG CTGGAGATGG ACACCGCAGG CTTTGGCGGT
ATTCGCTCTC AGCGTTACGC CATGGTAATC GACAATGGCG TGGTGAGCCT GCTGAATGTC
GAGGCGCCCA AGAGCTTCGA GGTCAGCAAG GCCGAGGTGG TACTGGCGGC GTTATAA
 
Protein sequence
MRLNKAQIGP PKFTVNHKDF SMIAQGQPLP AATLGQLTEN GMVNHDVNEL FANKKVVLFA 
VPGAFTPTCS EAHLPGYVVL ADQFKAKGVD IIACVSVNDA FVMKAWGEAQ NASELMMLAD
GDASFTKALG LEMDTAGFGG IRSQRYAMVI DNGVVSLLNV EAPKSFEVSK AEVVLAAL