Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3641 |
Symbol | |
ID | 4922175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4342862 |
End bp | 4343398 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640165263 |
Product | redoxin domain-containing protein |
Protein accession | YP_001095766 |
Protein GI | 127514569 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.731441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGATTGA ATAAGGCTCA AATTGGGCCA CCTAAGTTTA CTGTTAACCA TAAGGATTTT TCCATGATAG CCCAAGGACA ACCATTACCC GCCGCCACCT TAGGTCAGCT CACCGAGAAC GGCATGGTCA ACCATGATGT GAACGAACTG TTTGCCAACA AGAAGGTGGT GCTGTTTGCC GTACCCGGCG CCTTTACCCC AACCTGCTCA GAGGCGCATC TGCCCGGCTA TGTAGTACTG GCGGATCAGT TTAAGGCCAA AGGGGTCGAT ATCATCGCCT GCGTATCGGT TAACGATGCC TTCGTGATGA AGGCCTGGGG CGAGGCGCAA AATGCTAGCG AGTTGATGAT GTTGGCCGAT GGCGATGCCA GCTTTACCAA GGCATTGGGG CTGGAGATGG ACACCGCAGG CTTTGGCGGT ATTCGCTCTC AGCGTTACGC CATGGTAATC GACAATGGCG TGGTGAGCCT GCTGAATGTC GAGGCGCCCA AGAGCTTCGA GGTCAGCAAG GCCGAGGTGG TACTGGCGGC GTTATAA
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Protein sequence | MRLNKAQIGP PKFTVNHKDF SMIAQGQPLP AATLGQLTEN GMVNHDVNEL FANKKVVLFA VPGAFTPTCS EAHLPGYVVL ADQFKAKGVD IIACVSVNDA FVMKAWGEAQ NASELMMLAD GDASFTKALG LEMDTAGFGG IRSQRYAMVI DNGVVSLLNV EAPKSFEVSK AEVVLAAL
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