| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3614 |
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| Symbol | |
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| ID | 4922400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4311539 |
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| End bp | 4311943 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165236 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_001095739 |
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| Protein GI | 127514542 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAGC GCAGGCTAGG CCTGAATCTC AAGGGCAGAC ACCGCAGCGC CGGCATGACC
CTGCTCGAGG TGATCGTGGC CCTCATGGTG TTTGCCATCG CCGCCGTCTC CATCACCAAG
AGCCTGGGTG AGCAGATGGC CAACATGCCG ATCCTCGAGG AGCGCACCCT GGCCCAGTGG
GTGGCCAGCA ACCAGATGGT GGATGCCCGC CTGGAGAAGA AATTCCCGGA TCTCGGCCGT
AAAGACGGCA GCGTCGAACT GGCGGGAAAA GAGTGGTATT GGCGCAAAGA GGTGGTGAAA
ACCACAGATG ATAATTTTCG AATGATACGC ATCAGTGTCA GCGACGATGA GCGCTATAAG
CGCATCATCG CCCAGGTGAG CAGTTATGTG CTTAAGCAAG ACTAA
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| Protein sequence | MSKRRLGLNL KGRHRSAGMT LLEVIVALMV FAIAAVSITK SLGEQMANMP ILEERTLAQW
VASNQMVDAR LEKKFPDLGR KDGSVELAGK EWYWRKEVVK TTDDNFRMIR ISVSDDERYK
RIIAQVSSYV LKQD
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