| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3593 |
|---|
| Symbol | |
|---|
| ID | 4922561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4291447 |
|---|
| End bp | 4292172 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640165215 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095718 |
|---|
| Protein GI | 127514521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000030216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTC ACATGTCATT ATCAGCGATT TTGACCGAAG CTTATAACTT CTTTCGTAAC
CATATCCGCC AGTTAGCCGC ACTTACCGTG CCTATCTTAT TCCTACAGGT GGGGATTCAG
ATGTGGTTAG GCATGGAGAT CAATAGCGCA GATCTGGAGA ATCCCCAGTT TGGCGTGCCC
CACATGATCG CTATGATGGT GCTCTTGTTG GTCTTTTCAC TGCTTATCGC CGCCCTGACG
CTGTTTATGG AGGTGAGATC CCATGGGCAT GAGCCGTCGA CCGGCATACT GCTCAAGACC
AGCCTGAGTT TCGTGCCGCC GCTGCTGCTG GCCGGTGTCT TCTCTGGCCT GGCTATTCTG
GCTCCTGTGA TGCTGTTTGC CGCCTTTGGT CCTATCTGGC TGGTGGGTCT GGTGATCAGC
ATCTATGTGT TCGCTCGCCT GGCCTATGTG AACTTCATGG TGGTGGTCGA GCGTCTGACG
CCGCTGGAAG CGATCAAGGG TAGCTTCAAG TTTAGTGGTC CTATCGCCTT TAAGACCCTG
CTGGTACTCA TGCTCTATAT TCCGCTGTCG CTTATCGGCG GCACCCTGTC TAGCCTGGCA
CAATCCGTAG GCTTCCCGCT GGTGTTAGTG GTCGAGGTGT TGGTGGCCTT CTTCGGCCTG
TTCGTCAACG TAGCCCTGTT CCGCCTCTAC ATGGTGTCGC GTCCCAGCAT AGACGAGCAG
GTGTGA
|
|---|
| Protein sequence | MESHMSLSAI LTEAYNFFRN HIRQLAALTV PILFLQVGIQ MWLGMEINSA DLENPQFGVP
HMIAMMVLLL VFSLLIAALT LFMEVRSHGH EPSTGILLKT SLSFVPPLLL AGVFSGLAIL
APVMLFAAFG PIWLVGLVIS IYVFARLAYV NFMVVVERLT PLEAIKGSFK FSGPIAFKTL
LVLMLYIPLS LIGGTLSSLA QSVGFPLVLV VEVLVAFFGL FVNVALFRLY MVSRPSIDEQ
V
|
|---|
| |