| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3589 |
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| Symbol | |
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| ID | 4922557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4287146 |
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| End bp | 4288138 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165211 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001095714 |
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| Protein GI | 127514517 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG ACAACTTGGC GCGTATCGAC CTCAATCTAC TGGTGATGTT GCAGGTGTTA
CTGGAGGAGC GCAGCGTAAC CCGCGCCGCC AGCCGCCTGC ATCTGAGTCA ATCTGCCCTG
AGCAAGAGCC TCAACCGACT GCGCGATACC CTGGGGGATC CCCTGTTTAT CCGCACCGCC
CACGGCCTCA AGCCCACGGC CCACGCCGCC CTGCTGGGCC AGCAGCTGCC TGACATGTTG
CAGGGACTCT ACCAGCTGAC TCAGCCACCG AGTTTCAATC CCGCCAGCAG CAGGCGTCAG
TTCTCCTTCG CCATGGTGGA GAGTGCCTAT GAGACGCTGA TCCCCTACTT CATCGGCCCT
TTGCTCAACA ACGCCCCCAA TCTCAGGCTG GACTCCTACC TGTGGACGGA GAAGTCTCTC
TCCTCCCTGC AGAAGGGCCA GATAGATTTC GGCATCACGG GCAGAGACAT CAACCCACAG
TCGGATCTCA TCATCGACAG GCTGCCAGAA GGGATCGCTC ACCAGACACT GTTTACCGAT
CATCAGGTCT GCCTGGTGCG CCAAGGCCAC CCCATGCTGC CGGCCATTCG TAATCATCAA
TGGGATCTCG ACATCTATCT GGAGATGTCC CATGTGCAGG TACGCTGCGA GGGCAACGAG
TGGTGGGCGC TGGACTATTT CCTGGCGAAA TCGGGACAGA GACGTCACCT GAGCACCACA
GTGCCCGACT TCTATGGCGC CGCCAGCGTC TGCGCCCATA GCGATCTTAT CTTTACCCTG
CCCTCCAGCT TCGCCGCCCA CGCCCGCAAG CTCTATGCCT TGGAGGAGCT GCCGCTGCCG
TTCGACTTCC ACTCCCTGGC CTATGTACTG CTGTGGCACG AACGCAACGA TGACGAACCC
GGGCATAAGT GGATCCGCGA GACCATCTGC AAGCGTGTCG CCCAGGCGGT CAACCAGCCC
GAAGATGCGT TATCTGCATC CGGTTCAGCT TAG
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| Protein sequence | MNLDNLARID LNLLVMLQVL LEERSVTRAA SRLHLSQSAL SKSLNRLRDT LGDPLFIRTA
HGLKPTAHAA LLGQQLPDML QGLYQLTQPP SFNPASSRRQ FSFAMVESAY ETLIPYFIGP
LLNNAPNLRL DSYLWTEKSL SSLQKGQIDF GITGRDINPQ SDLIIDRLPE GIAHQTLFTD
HQVCLVRQGH PMLPAIRNHQ WDLDIYLEMS HVQVRCEGNE WWALDYFLAK SGQRRHLSTT
VPDFYGAASV CAHSDLIFTL PSSFAAHARK LYALEELPLP FDFHSLAYVL LWHERNDDEP
GHKWIRETIC KRVAQAVNQP EDALSASGSA
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