Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3582 |
Symbol | |
ID | 4922550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4279646 |
End bp | 4280356 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640165204 |
Product | hypothetical protein |
Protein accession | YP_001095707 |
Protein GI | 127514510 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCACAAG CCACAGAGAT CGATTTAGCC TACCTAAACC GCATCAACTG CAACACAGAG GCCCAGCTGC AAATTCTCAC GCCGCTCAGG CCTATCAGGC TCAAGACCCG GCTGATCGGC ATAGACCCGG ACAACGCCAT CATTCTCGCC CTTGGCCAGG ACAAATACTG GCAGGCCGCC CAGGACTATA TTACCCAGGG ACAAGGTGTG GTGGTGCGCC TGATCAACAG CGACGACCCC GAGGCCAACA TCCTCGCCTT TCGCAGCCAG ATCAAGACCC TGCTCAACAA CGCCGGGCGC TGGTTAGTGG TGAAATACCC CAAGGTGCTA CAGAGCGTAG CCCTGAGACA ACACTGCCGC ATTCCGGTCA ATCTGGCCGC CTCGATCCAT GAGCGCACGG CAGAGAGCCA CTCCACCCAT GTATGCTCCA GCGGCTTTCT GCAGGATATC TCGGTCAAGG GCGGCGCCTA CATAGGTGAT GAGATTGAGG GAGGCGCCCT GAATCAGGGC TATCGTTTAC AGGTCAAATT TGGGCAGTCG CTGGAGACCC TCAGCGTGCC TATCCTACTC AAGAACATCC AACCTCCAGG CGTGGGGCGC AGCCAGTATC AATATGGCTT CATCTTAGAT GAGAGTCAGG ATGAGGAGAC GTTGGGCGAC TTTGCCCAGA AGGTGATCAT CAATCACCTA ATGCAGCAGC CTAAGGCATA G
|
Protein sequence | MPQATEIDLA YLNRINCNTE AQLQILTPLR PIRLKTRLIG IDPDNAIILA LGQDKYWQAA QDYITQGQGV VVRLINSDDP EANILAFRSQ IKTLLNNAGR WLVVKYPKVL QSVALRQHCR IPVNLAASIH ERTAESHSTH VCSSGFLQDI SVKGGAYIGD EIEGGALNQG YRLQVKFGQS LETLSVPILL KNIQPPGVGR SQYQYGFILD ESQDEETLGD FAQKVIINHL MQQPKA
|
| |