Gene Shew_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3582 
Symbol 
ID4922550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4279646 
End bp4280356 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content57% 
IMG OID640165204 
Producthypothetical protein 
Protein accessionYP_001095707 
Protein GI127514510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACAAG CCACAGAGAT CGATTTAGCC TACCTAAACC GCATCAACTG CAACACAGAG 
GCCCAGCTGC AAATTCTCAC GCCGCTCAGG CCTATCAGGC TCAAGACCCG GCTGATCGGC
ATAGACCCGG ACAACGCCAT CATTCTCGCC CTTGGCCAGG ACAAATACTG GCAGGCCGCC
CAGGACTATA TTACCCAGGG ACAAGGTGTG GTGGTGCGCC TGATCAACAG CGACGACCCC
GAGGCCAACA TCCTCGCCTT TCGCAGCCAG ATCAAGACCC TGCTCAACAA CGCCGGGCGC
TGGTTAGTGG TGAAATACCC CAAGGTGCTA CAGAGCGTAG CCCTGAGACA ACACTGCCGC
ATTCCGGTCA ATCTGGCCGC CTCGATCCAT GAGCGCACGG CAGAGAGCCA CTCCACCCAT
GTATGCTCCA GCGGCTTTCT GCAGGATATC TCGGTCAAGG GCGGCGCCTA CATAGGTGAT
GAGATTGAGG GAGGCGCCCT GAATCAGGGC TATCGTTTAC AGGTCAAATT TGGGCAGTCG
CTGGAGACCC TCAGCGTGCC TATCCTACTC AAGAACATCC AACCTCCAGG CGTGGGGCGC
AGCCAGTATC AATATGGCTT CATCTTAGAT GAGAGTCAGG ATGAGGAGAC GTTGGGCGAC
TTTGCCCAGA AGGTGATCAT CAATCACCTA ATGCAGCAGC CTAAGGCATA G
 
Protein sequence
MPQATEIDLA YLNRINCNTE AQLQILTPLR PIRLKTRLIG IDPDNAIILA LGQDKYWQAA 
QDYITQGQGV VVRLINSDDP EANILAFRSQ IKTLLNNAGR WLVVKYPKVL QSVALRQHCR
IPVNLAASIH ERTAESHSTH VCSSGFLQDI SVKGGAYIGD EIEGGALNQG YRLQVKFGQS
LETLSVPILL KNIQPPGVGR SQYQYGFILD ESQDEETLGD FAQKVIINHL MQQPKA