| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3581 |
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| Symbol | |
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| ID | 4922549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4278101 |
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| End bp | 4279486 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165203 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001095706 |
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| Protein GI | 127514509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCAG ATACCGAGAA AAATTCTATC TGCTCACGAA TGAGGGAACG ACAGATGATG
CGAAAGATTA TCGCACTGTG CCTCTCCATT GGGGGAATCC TCTCCTCCAT GGGGGCGCAG
GCAACTCAAG CCGAAGACAT AAAAAGCTTC ACGTTAGATA ATGGCATGAA AATCATGGTG
CTAGAAGACG CCTCGATCCC AAATGCCAAC ATGTATCTAT TTTGGAAGGT GGGTTCCCGC
AACGAGGTGC CTGGCATCAC GGGGATCTCC CACTTCTTCG AACACATGAT GTTCAACGGC
TCGAAGAAAT TTGGTCCTAA GATGTTCGAC CGCACCATGG AGGCGGCGGG CGGTGCCAAC
AACGCCTACA CCACAGAAAA CCTGACCGTC TACACCGACT GGTTCCCGGC CAATGCCCTG
GAGACCATCT TCGATCTCGA GGCCGACCGT ATCGCCCATC TGGATATCAA TCCTGAGATG
GTAGAGAGCG AGCGTGGCGT GGTCGCCTCT GAGCGCACCA CAGGCCTGGA AAACTCTAAC
TGGCGTACCC TGCAGGAAGA GATCAAGGGC GCCGCATTTC GCGCACACCC CTATAGCTGG
TCTGTCATAG GTCATGAGTC GGATATCGCC GCCTGGACCC AGGACGATCT GGTGCAGTAC
CACAAGACCT ACTATGCGCC TAACAATGCC GTGGTGGTGA TTGCCGGTGA TGTGAAGCTT
AACGAAGTCA AGGCCTTGGC CAACAAGTAC TTTGCGCCGA TCCCCGCCCA GACGCCGCCC
CGCGAGGTGA AGACGGTCGA GCCACTGCAG AAGGGTGAGC GCCGCGTCTT CGTACAGAAG
GCCTCGGTCA GCACGCCGAA CGTGATGCTG GCCTACCATG TGCCGGCGAC CTCGAATCAG
GACTACTACG CCCTGGATCT GTTGTCTTCT ATCCTGACCA CGGGCAACAG CTCGCGCCTC
TATCAAGGCT TGGTGGAGAA GCAGGTGGCC ATTGAGGTGG AAACCTATAT GCCGATGAGC
TTTGACCCTA ACCTCTTCTA TGTGATGGGC GTTGCCAACC CTGGCATCAC AGCACAGGAG
CTGGAGAGCG GCATGATCGG TGAGATCAAC CGTATCGCCC GCGAAGGCGT GACCCAGGAT
GAGCTTGAGA AAGTCAAAAA TATCAAACTG ATGAACTTCT ACCGCGCCAT GGAAACCATT
AACGGTAAGG CCAATACCTT AGGAACCTAC GAGCTCTATT TCGGCAGCTT CGACAAGCTG
TTCAATGCGC CTGAGGCCTA TAACAAGGTG ACCCCAGAAG ATATTCAGCG TGTTGCGCAA
ACCTATCTAC GTCGCGCCAA CCGCACAGTT GCCGTACTGG CGGCCACAGA GGAGAGTGAC
CAATGA
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| Protein sequence | MPPDTEKNSI CSRMRERQMM RKIIALCLSI GGILSSMGAQ ATQAEDIKSF TLDNGMKIMV
LEDASIPNAN MYLFWKVGSR NEVPGITGIS HFFEHMMFNG SKKFGPKMFD RTMEAAGGAN
NAYTTENLTV YTDWFPANAL ETIFDLEADR IAHLDINPEM VESERGVVAS ERTTGLENSN
WRTLQEEIKG AAFRAHPYSW SVIGHESDIA AWTQDDLVQY HKTYYAPNNA VVVIAGDVKL
NEVKALANKY FAPIPAQTPP REVKTVEPLQ KGERRVFVQK ASVSTPNVML AYHVPATSNQ
DYYALDLLSS ILTTGNSSRL YQGLVEKQVA IEVETYMPMS FDPNLFYVMG VANPGITAQE
LESGMIGEIN RIAREGVTQD ELEKVKNIKL MNFYRAMETI NGKANTLGTY ELYFGSFDKL
FNAPEAYNKV TPEDIQRVAQ TYLRRANRTV AVLAATEESD Q
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