Gene Shew_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3581 
Symbol 
ID4922549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4278101 
End bp4279486 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content55% 
IMG OID640165203 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001095706 
Protein GI127514509 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCAG ATACCGAGAA AAATTCTATC TGCTCACGAA TGAGGGAACG ACAGATGATG 
CGAAAGATTA TCGCACTGTG CCTCTCCATT GGGGGAATCC TCTCCTCCAT GGGGGCGCAG
GCAACTCAAG CCGAAGACAT AAAAAGCTTC ACGTTAGATA ATGGCATGAA AATCATGGTG
CTAGAAGACG CCTCGATCCC AAATGCCAAC ATGTATCTAT TTTGGAAGGT GGGTTCCCGC
AACGAGGTGC CTGGCATCAC GGGGATCTCC CACTTCTTCG AACACATGAT GTTCAACGGC
TCGAAGAAAT TTGGTCCTAA GATGTTCGAC CGCACCATGG AGGCGGCGGG CGGTGCCAAC
AACGCCTACA CCACAGAAAA CCTGACCGTC TACACCGACT GGTTCCCGGC CAATGCCCTG
GAGACCATCT TCGATCTCGA GGCCGACCGT ATCGCCCATC TGGATATCAA TCCTGAGATG
GTAGAGAGCG AGCGTGGCGT GGTCGCCTCT GAGCGCACCA CAGGCCTGGA AAACTCTAAC
TGGCGTACCC TGCAGGAAGA GATCAAGGGC GCCGCATTTC GCGCACACCC CTATAGCTGG
TCTGTCATAG GTCATGAGTC GGATATCGCC GCCTGGACCC AGGACGATCT GGTGCAGTAC
CACAAGACCT ACTATGCGCC TAACAATGCC GTGGTGGTGA TTGCCGGTGA TGTGAAGCTT
AACGAAGTCA AGGCCTTGGC CAACAAGTAC TTTGCGCCGA TCCCCGCCCA GACGCCGCCC
CGCGAGGTGA AGACGGTCGA GCCACTGCAG AAGGGTGAGC GCCGCGTCTT CGTACAGAAG
GCCTCGGTCA GCACGCCGAA CGTGATGCTG GCCTACCATG TGCCGGCGAC CTCGAATCAG
GACTACTACG CCCTGGATCT GTTGTCTTCT ATCCTGACCA CGGGCAACAG CTCGCGCCTC
TATCAAGGCT TGGTGGAGAA GCAGGTGGCC ATTGAGGTGG AAACCTATAT GCCGATGAGC
TTTGACCCTA ACCTCTTCTA TGTGATGGGC GTTGCCAACC CTGGCATCAC AGCACAGGAG
CTGGAGAGCG GCATGATCGG TGAGATCAAC CGTATCGCCC GCGAAGGCGT GACCCAGGAT
GAGCTTGAGA AAGTCAAAAA TATCAAACTG ATGAACTTCT ACCGCGCCAT GGAAACCATT
AACGGTAAGG CCAATACCTT AGGAACCTAC GAGCTCTATT TCGGCAGCTT CGACAAGCTG
TTCAATGCGC CTGAGGCCTA TAACAAGGTG ACCCCAGAAG ATATTCAGCG TGTTGCGCAA
ACCTATCTAC GTCGCGCCAA CCGCACAGTT GCCGTACTGG CGGCCACAGA GGAGAGTGAC
CAATGA
 
Protein sequence
MPPDTEKNSI CSRMRERQMM RKIIALCLSI GGILSSMGAQ ATQAEDIKSF TLDNGMKIMV 
LEDASIPNAN MYLFWKVGSR NEVPGITGIS HFFEHMMFNG SKKFGPKMFD RTMEAAGGAN
NAYTTENLTV YTDWFPANAL ETIFDLEADR IAHLDINPEM VESERGVVAS ERTTGLENSN
WRTLQEEIKG AAFRAHPYSW SVIGHESDIA AWTQDDLVQY HKTYYAPNNA VVVIAGDVKL
NEVKALANKY FAPIPAQTPP REVKTVEPLQ KGERRVFVQK ASVSTPNVML AYHVPATSNQ
DYYALDLLSS ILTTGNSSRL YQGLVEKQVA IEVETYMPMS FDPNLFYVMG VANPGITAQE
LESGMIGEIN RIAREGVTQD ELEKVKNIKL MNFYRAMETI NGKANTLGTY ELYFGSFDKL
FNAPEAYNKV TPEDIQRVAQ TYLRRANRTV AVLAATEESD Q