| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3580 |
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| Symbol | |
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| ID | 4922653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4276656 |
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| End bp | 4278104 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165202 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001095705 |
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| Protein GI | 127514508 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC TATTGACTCA AATTCCCCAA GGCTTTGCCA AGCTGGGCAC GGCGGCCATG
GTGGCCGGCG CCCTGGCACT CTCGGGCTGC GCCGCGACGA CAACGAGCCA GACGGTCGAC
ACCGGCAGCT TCAGCATGCC CGCCTATGAG CAGTATCAAC TGAGTAACGG CATGACTGTC
TATCTGATGC CACAGACAGA GGTGCCGCTG ATCACCGTCA GCGCCGTGGT GCGCGCCGGT
GCGGTCAAGG ACACCACCTC TGGGGTGGCC AACATGACCG CCAAGTCCTT GTTGCTGGGC
GCTAACGGTA AGAGCAAGTC AGATATCGAG CAGATGGTCG ACTTCTTAGG CGCCTCGATC
GCCGCCGATG CGGGTAAGGA AGGCAGCTTT ATTGATGCCG ACTTCATGGC GAAAGACACA
GACAAGATGC TGCCTCTGGT GCGGGATCTG CTGCGCGCCC CTGATTTCGA CGGCGGCGAG
TTCGACAAGC TGCGTCAACG TGAAATGGCG GGCCTGGCCC AGGAGAAGGA GAGCCCACGC
GTGGTGATCC ATCGCTACTT CGACAAGCTG GTATTTGGCG ATCACCCCTA CGGCAATCCG
GCATCGGGTA CCCGTGACTC GCTGGCCGAG TTGACGGTTA ACCAGCTGCG CGCCTTCCAC
AAGAGCTATT ATCAGCCACA AAACATCGCC ATCTCGGTCG TCGGTGATTT TAAGCCAGGC
GAGATGAAGG CAAGACTCGA CAAGCTGTTT GGCGATTGGC ACAACGGCGA GGCGATCGCC
AAGCAAGACC TGGCCAAAGG CCAGCCGTCG CTGGATGCCA GCAAGGTGCT CTTGGTCAAC
AAGGGCGATG CCATCGAGAC CACCTTCCTT ATCGGTGGTA AGGGCATTAG CCGCAACAAT
CCAGATTACG TTGGGCTGCA GGTGGTCAAC ACTATCCTGG GTGGCCGTTT CACCTCATGG
CTCAACGACG AGCTCAGGGT GAACGCCGGT CTGACCTATG GTGCCCGATC GGCCTTTACC
CCCTATTCAC AAGGGGGCGT ATTCAGGATC AGTACCTTCA CCAAGAGTGA TACTACCAAG
GAGGCGATCG ATCTGGCGCT GAAGACCTAT TCGCGTCTGT GGCAGACGGG GATAGATCAG
CCGACCCTGG ACTCGGCCAA GGCCTATGTG AAGGGGCAGT TCCCGCCTAA GTTCGAGACC
AGCGAACAGC TGGCCGGCCT GCTGTCGAGC ATGTACCTCT ATGGCTTCGA TGACAGCTTC
ATCAACGACT TCCAGAAGAA TGTCGATGGC CTAACCCTGG CAGAGACCCA GCGTCTGGTG
AACAGCTACT TCCCACAGGA CAAGCTGCAA TACGTGCTGA TTGGCAACGC CAGCAAGATC
GCCGATATCG CCGCCCAGTA TGGTGAGGTG AAGCAGGTGG AGATCAATGC GGTCGGTTTC
TCGCAATAA
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| Protein sequence | MKTLLTQIPQ GFAKLGTAAM VAGALALSGC AATTTSQTVD TGSFSMPAYE QYQLSNGMTV
YLMPQTEVPL ITVSAVVRAG AVKDTTSGVA NMTAKSLLLG ANGKSKSDIE QMVDFLGASI
AADAGKEGSF IDADFMAKDT DKMLPLVRDL LRAPDFDGGE FDKLRQREMA GLAQEKESPR
VVIHRYFDKL VFGDHPYGNP ASGTRDSLAE LTVNQLRAFH KSYYQPQNIA ISVVGDFKPG
EMKARLDKLF GDWHNGEAIA KQDLAKGQPS LDASKVLLVN KGDAIETTFL IGGKGISRNN
PDYVGLQVVN TILGGRFTSW LNDELRVNAG LTYGARSAFT PYSQGGVFRI STFTKSDTTK
EAIDLALKTY SRLWQTGIDQ PTLDSAKAYV KGQFPPKFET SEQLAGLLSS MYLYGFDDSF
INDFQKNVDG LTLAETQRLV NSYFPQDKLQ YVLIGNASKI ADIAAQYGEV KQVEINAVGF
SQ
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