| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3565 |
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| Symbol | |
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| ID | 4922700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4257269 |
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| End bp | 4260379 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165187 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001095690 |
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| Protein GI | 127514493 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.909012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCCT ACATCACAAG ACATCCCACC CTGGCAAACC TCTTGATGTT GGCCTTCCTG
CTGCTGGGTC TGCTCAACAT GAGCAGCATC AAGCGCGAGA CCTTTCCCGA GTTTGCCCCG
CCCTATGTGA TGGCGACCGT GGTCTACCCG GGCGCCTCGC CGGTCGAGGT GGAGGAGAGC
ATCTGTTTGC GGATGGAGGA TGCGGTCGAC GGCCTGGCCA ACATCGAAGA GGTCAAGTGT
GACGCACAGG AGGGGATAGC CTCAATGCGC CTCAAGCTGG AGCCCAAGGC AGATCTGGGG
CGCATGCTGG TGGATGTGCA GACCCAGATC AACGCGATTC AGAACTTCCC GGCGCAGATC
GAGCCGCCCA TCGTCAAGGA GCTGGATTGG GCGGAGCCCG TGGTGGATAT CGCCATCGTC
GCCGACACCA GTTGGCCACA CCTGAAGAGC TATGCCGAGG ATGTGAAGCG TCGTCTCAAG
ATAGACGCCG GGGTGAGCCT GGTCTCCATC GCAGGCTTCT CGGATCATCA GCTGCGCATC
GAGCTCAATC AGGCGGATAT GCGCAGGCTG GGGCTGACCG CCGCCGAGAT TGCCGATAAG
GTCGGCCGTC AGAACGTGAA GATGCCGGCG GGGAATATCG AGCTCAAGGA TAAGAATATC
CTGCTGAGGT TCGATGAGCG TAAGGTCACC CCGGCTTCGC TGGCGGAAAT CATCATAGCC
TCCAATCCCG ATGGTAGCGT GGTGCGTCTT GGCAATATCG CCACCATCAG CGACAGGTTC
GAGCTGGATG AGGAGCATAT TCAGTTCAAC GGCAGCAACG CGGCGCTGAT CAAGGTGCAG
AAGAACAAGG CCGACGACGC GCTGCGGATC AAGGCCAAGG TGAGCGAGTT TATCGAACTG
GAGCAGGCCC GCGCGCCGGA CGGTGTGCGC CTGACCATGA CCAACGATCT CTCCTCCGTG
CTGCAAGACA GGCTGAAGAT GATGATCACC AACGGCTGGC AGGGGATCAT CCTGGTCTTC
CTCAGCATGT GGCTGTTTTT CTCCCTGCGC TACTCCTTCT GGGTGTCGGC CGGTTTGCCG
GTCGCCTTCC TCGGCGGACT CTACTTGATG AGCCTGTTCG GCGTGTCCAT CAACCTCATG
AGCCTGGTGG GGCTTTTGAT GGCTATCGGT ATCATGATGG ATGACGCCAT AGTGATCGCC
GAGTCGATCG CCTCCCACAT AGACAGAGGC ATGGCGCCCC ATGAGGCCGT GGTGAAGGGA
GTGCAGAAGG TCGCCCCAGG TGTGGTCTCC TCATTCCTGA CGACTGTGCT GATCTTCAGC
GCGCTCTTGG GGCTGGATGG CCAGATGGGG GCGGTACTGT CGGCCATTCC GACCGTGCTG
ATCATGGTGC TGACCATCAG TCTGTTCGAG GCCTTCTTGA TTCTGCCCAA TCACCTGAAT
CACTCACTGG CACACGCCAA GGCGGAGACC AAGCCTAACC GCATCGGCGA GCTTAAGGCT
AAGTTTCTCA CCCGCTTCGA AGCGTTTCGT AATAACAGCT TGGTGACTCT GGTGACCTTC
ATGGTGCGCT GGCGCTATGT CAGCGTCGGC GCCACCATAG GCCTGCTGCT TGTCTCTGTC
TCTTTAGTGG TGGGCGGCGC GCTCAAGTTT GTGCCTTTCC CCGATCTGGA TGGCGATATC
GCCGAGGCGC GTATCATACT GCCGCCGGGT AGCTCCCTGA GTCAGACCCA GAAGGTGGTC
GAGACACTGA TCGCCAGCGC CAAGCGTGTG GGCGACAGAT ACACCCATGA GGTGGAGGAT
GAGCATGAGC TGATCCGGGA TATTACGGCA CAGTACAACT TTAACGCCGA TGCCGGTGAG
AGCGGCCCCC ATGTGGCGAC CGTCAGGCTG GATCTGTTGT CGGCAGAGAC CCGCAATACC
CTGATCGAGG AGTTTATCCG CGATTGGCGT ATCGAGACGG GTGAGCTGGC GATTCCGCTG
TCCTTGGTGT TCAAGCAGCC GACCATGGGG CCGGCGGGGC GGGATATAGA GATCCGCCTG
CAGGGCGACG ATCTGGATAT GCTGAAACAG GCATCCGTGT CGCTGCAGAG TTATCTGGGG
CAGTTTGATG GCATCAGCGG CATACTCGAC GACATGCGTC CGGGCAAGGA GGAGATCAAG
GTGAGCCTGC GTCCCGGCGC CGAGAGCTTC GGCATTGATG GCCAACTGGT GGCGGCCCAG
CTGCGCAGCG CCTACTTTGG TCAGCTGGCC GACGAGGTGC AGGTAGGGCC GGAAAATATC
GAGATCGAGG TGCGGCTCAA CAAGTTGCAG GCAGGGGATC TACAGGCCCT GGCCAACTTC
CCCATCATGC TGAGTGATGG CAGTCAGCTG CCGCTCTCCT CCATCGCCCT GCTGCAGGAT
CAGCGCTCCT ATGTGCGTAT TCAGCGCATC AATGGTCTGC GCAGCGTGAC CGTGATGGCC
GATGTGGACA ATCAGCGCGC CAATGCCAAC GAGACCATAG CCGCGATAAA GCGCGAGTGG
CTGGCTCAGG TGCAGCAGAG CTATCCTCAG CTGAGGGTCG ACTTCGAAGG CTCGGCCAAG
GAGACGGCCA AGACCGGCAG CTCTATGGGC AAAGGCTTCC TCATCGGTCT GTTTGGCCTG
TTCGCCATCC TGAGTTTTCA GTTCAGGAGC TATCTGGAAC CCGCCGTGGT GATGCTGGCG
ATCCCGCTGG CGCTGATCGG CGTGCTCTGG GGCCATCTGC TGCTGGGCTA TAACCTCTCC
ATGCCCTCTA TCATGGGCTT CATCTCGCTG GCGGGAATCG TAGTGAACGA CTCCATCCTG
CTGGTGCAGT ACATACGCCA CCATGTGGAT GAGGGAGATA GTGTGCATCA GGCGGTGGTG
AGCGCCAGTC GCGAGCGTTT CAGGGCGGTG TTTCTCACCT CGCTGACCAC GGCGGCGGGC
CTCTTGCCCC TGCTGCTGGA AACCAGCCTG CAGGCCCAGG TGGTGCAGCC TCTGGTGGTG
TCGATCGTCT TCGGTATCTT CGCCTCCACC CTGCTGGTGC TGTTTATCAT CCCCTGTGCC
TACGCCATCC TGGCCGACTT TGACAAGGTG AAGCCCCATA CCGAGCTGTA A
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| Protein sequence | MIAYITRHPT LANLLMLAFL LLGLLNMSSI KRETFPEFAP PYVMATVVYP GASPVEVEES
ICLRMEDAVD GLANIEEVKC DAQEGIASMR LKLEPKADLG RMLVDVQTQI NAIQNFPAQI
EPPIVKELDW AEPVVDIAIV ADTSWPHLKS YAEDVKRRLK IDAGVSLVSI AGFSDHQLRI
ELNQADMRRL GLTAAEIADK VGRQNVKMPA GNIELKDKNI LLRFDERKVT PASLAEIIIA
SNPDGSVVRL GNIATISDRF ELDEEHIQFN GSNAALIKVQ KNKADDALRI KAKVSEFIEL
EQARAPDGVR LTMTNDLSSV LQDRLKMMIT NGWQGIILVF LSMWLFFSLR YSFWVSAGLP
VAFLGGLYLM SLFGVSINLM SLVGLLMAIG IMMDDAIVIA ESIASHIDRG MAPHEAVVKG
VQKVAPGVVS SFLTTVLIFS ALLGLDGQMG AVLSAIPTVL IMVLTISLFE AFLILPNHLN
HSLAHAKAET KPNRIGELKA KFLTRFEAFR NNSLVTLVTF MVRWRYVSVG ATIGLLLVSV
SLVVGGALKF VPFPDLDGDI AEARIILPPG SSLSQTQKVV ETLIASAKRV GDRYTHEVED
EHELIRDITA QYNFNADAGE SGPHVATVRL DLLSAETRNT LIEEFIRDWR IETGELAIPL
SLVFKQPTMG PAGRDIEIRL QGDDLDMLKQ ASVSLQSYLG QFDGISGILD DMRPGKEEIK
VSLRPGAESF GIDGQLVAAQ LRSAYFGQLA DEVQVGPENI EIEVRLNKLQ AGDLQALANF
PIMLSDGSQL PLSSIALLQD QRSYVRIQRI NGLRSVTVMA DVDNQRANAN ETIAAIKREW
LAQVQQSYPQ LRVDFEGSAK ETAKTGSSMG KGFLIGLFGL FAILSFQFRS YLEPAVVMLA
IPLALIGVLW GHLLLGYNLS MPSIMGFISL AGIVVNDSIL LVQYIRHHVD EGDSVHQAVV
SASRERFRAV FLTSLTTAAG LLPLLLETSL QAQVVQPLVV SIVFGIFAST LLVLFIIPCA
YAILADFDKV KPHTEL
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