| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3558 |
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| Symbol | |
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| ID | 4922693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4249727 |
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| End bp | 4250188 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165180 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001095683 |
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| Protein GI | 127514486 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGG ATAGCAAAGA CAAGCAGATC TTAAGCATAC TGCAGGAGGA GGGACGCCTG
CCCGTGGCCG AGTTGGCCAA TCGGCTCAAC CTCTCCGACA CCCCCTGTCT GCGGCGCATC
AAGAAGCTGG AGCAGGCGGG CTTTATTCAA GGCTACAGCG CCAGGCTCGA CCCTAAGTCG
CTGGCACTCA ATGTGATTGT CTACGCCTTC GTGCGCCTCA CCGAGAACTC CGCCGCCTAT
GGTGAACAGT TCGAGCAGGA GATGAGCCGT CTGCCTCAGG TGCAGGAATG CTCGGTGATC
ACCGGCGCTC ACGACTACCT ACTCAAGATA GTCGCCCACG ATCTGCTGGA GTATGAAGGC
TTCGTCAAAC ACTCACTGGG CGGCCTCAAG TGTATTGCCA GCATAGAGTC GACCGTAGTG
CTGAAACAGA CCTTCTCCCG TCATCAACTA CCAATCACTT AG
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| Protein sequence | MKLDSKDKQI LSILQEEGRL PVAELANRLN LSDTPCLRRI KKLEQAGFIQ GYSARLDPKS
LALNVIVYAF VRLTENSAAY GEQFEQEMSR LPQVQECSVI TGAHDYLLKI VAHDLLEYEG
FVKHSLGGLK CIASIESTVV LKQTFSRHQL PIT
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