| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3552 |
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| Symbol | |
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| ID | 4922687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4240694 |
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| End bp | 4241707 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640165174 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001095677 |
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| Protein GI | 127514480 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTA CTCTAATTGG TATCGATTTG GCAAAAAATG TTCTTCAGGT TTGCGGTGTC
AATCAAGTCG GTAAAACGCT CTTTAATCGC ACCGTTAAAC GCACTCAACT GTTGAAAACG
CTCGTTCAGT ATCCAGATGC AGTGATTGCC ATGGAAGCCT GTAGTGGCTC AAATTATTGG
GGCCGAGAGC TGTTGTCGCG TGGATTTGAG GTAAAACTTA TCCCACCACA GCATGTGAAG
CCCTTCGTGA AAGGCAATAA AAATGACCGC AATGATGCCT TTGCAATCTG TGAGGCTGCG
ATGCGCCCCA ACATTATCTT CGTTAAGCCA AGAACCTTAG CGCAGGTCGA TATCATTATT
TCCCATCGAA TTCGCGAGCG TCGTATTCGT GTCAGAACCG CGTTGACCAA TCAAATACGT
GGATTGTTGA GTGAATACGG CATTGTTATT CCCAAAGGCC GCGACCCGCT CAACCTTGCT
CTACCTGAGT TACTCGAAGA TGCCGATAAC TCACTAACCA CCACCGCCCG CAGGTATATC
AGAGAGTTAC TTGATGAGCT ATATGCCATC AATGCTTCGA TTAAAGCACT GGAAAAAGAG
ATTCGACTAC AGGCAAGAAA TCATGAAGAT ACCAAGCGGT TAACCGCCAT ACGAGGTGTC
GCTGAAATTA TTGCTACGGC GTCGGTATCG TTCGCTGGTG ATGGTTCTGG GTATCAAAAT
GGGCGACATT TCTCGGCAAA TTTGGGGCTG GTACCGAAAG AATTCTCAAG TGGTGGAAAA
CAGAAATTAG GAGCTATCAC CAAGCGGGGA AACAGCTATC TAAGACGACA GCTGATTCAA
GGTGCTTGGT CTGTCATACG CTATGCAAAG AATAATGACG ACAGGTTATC TGTCTGGGCA
AGAAAGGTCA TTGAACGAAG AGGCAAACAG AAAGCGGCGG TAGCTGTGGC CAACAAACTC
GCCAGGATAA TTTGGGCGAT GCTTTACTAC AAAACGGAGT ACAGACCTAG CTAA
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| Protein sequence | MKVTLIGIDL AKNVLQVCGV NQVGKTLFNR TVKRTQLLKT LVQYPDAVIA MEACSGSNYW
GRELLSRGFE VKLIPPQHVK PFVKGNKNDR NDAFAICEAA MRPNIIFVKP RTLAQVDIII
SHRIRERRIR VRTALTNQIR GLLSEYGIVI PKGRDPLNLA LPELLEDADN SLTTTARRYI
RELLDELYAI NASIKALEKE IRLQARNHED TKRLTAIRGV AEIIATASVS FAGDGSGYQN
GRHFSANLGL VPKEFSSGGK QKLGAITKRG NSYLRRQLIQ GAWSVIRYAK NNDDRLSVWA
RKVIERRGKQ KAAVAVANKL ARIIWAMLYY KTEYRPS
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