| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3551 |
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| Symbol | |
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| ID | 4922854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4238853 |
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| End bp | 4239992 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165173 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001095676 |
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| Protein GI | 127514479 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA CTCCCTCGAT CCCCTTGATG GTGATCCTGA TGATGTTTCC CCAGATAGTG
GAAACCCTCT ACAGCCCTGC ACTGCCCCAC ATTGCCGCGG GCTTTGACGT GCCATTGGCC
CTGGCGGGCC AGACGCTATC CATCTATTTC CTGGCCTTCG CCTTCGGCGT GGTGTGCTGG
GGAATTCTAT GCGACCACCT GGGCAGGCGC CGCACCATGC TGTTGGGGCT GGGGCTCTAT
GGCATCGCGG CCTTTGCCGC CCTATGGGCG CCCAGTTTCC AATGGCTGCT GGCGATGCGC
GCCCTCAGTG CCTTCGGCGC CGCCGTGGGT TCTGTGGTCA CCCAGACCAT GTTGAGAGAC
AGCTTCGACG GCACTGCTCT GGCCAAGGTG TTCGCCTATA TGGGCATGGG AATCGCCATC
AGCCCCGTCG TCGGTATGCT CTCTGGCGGA TTACTAACAA GCCTAGGCGG CTACCCCGCA
GTATTCTTCA CCCTATCTCT GATGGCAGTG TTACTCTACG CCGTCTGTCT GCTGCGCCTG
CCCGAGACGC GCCCGGCCAC CATGCAGCCT CTTCCTCTTT GGGCGCTCGC CAAGCGCCTG
GCGACAGATG GCAATATTTG GCACAACGCC TTGCTGGTCG CGGGTTTCAA TGTGTTGCTG
TTTAGCTACT ACCTACAGGG TCCCTTTGTA TTTCAACGTC TGGGATTGAG CACACAGGCC
TTTGGCTATA GTGGCATCGC ACTGGCAATC GGCACTCTGG TCGGCAGCGC GATCAACAAA
ACGTTACTGC AGCGGGGGGC TTCGCAGCCT CGTTTGCTAA GGCTAGCCAG CCTGCTGGCC
TTAGTCGGCG CTGTTGGGGT GTATCTTAGC GAGACCCATC TTGGCTTCCT GCTACCCATG
GTATTGATCG TCGCCGCCTT TGGCATCGCC ATTCCCAACA TTCTCAGCCA AGCCCTAGTG
GAGTATCGCG ACCAGGCCGG GGCGGCCGGC GCCCTGTTCG GCCTACTCTA TTACTTGCTT
ATCGCCCTGG GACTGGCCAT GGTTAGCCTG GCCGAGCAGC TGGGCGGGCC GCTACTCATC
ACCAGCCTGC TGCTCAGTCT GGCGATAGGA AGAAAACAGT TTGTAGAAAT GGTGCGCTGA
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| Protein sequence | MKTTPSIPLM VILMMFPQIV ETLYSPALPH IAAGFDVPLA LAGQTLSIYF LAFAFGVVCW
GILCDHLGRR RTMLLGLGLY GIAAFAALWA PSFQWLLAMR ALSAFGAAVG SVVTQTMLRD
SFDGTALAKV FAYMGMGIAI SPVVGMLSGG LLTSLGGYPA VFFTLSLMAV LLYAVCLLRL
PETRPATMQP LPLWALAKRL ATDGNIWHNA LLVAGFNVLL FSYYLQGPFV FQRLGLSTQA
FGYSGIALAI GTLVGSAINK TLLQRGASQP RLLRLASLLA LVGAVGVYLS ETHLGFLLPM
VLIVAAFGIA IPNILSQALV EYRDQAGAAG ALFGLLYYLL IALGLAMVSL AEQLGGPLLI
TSLLLSLAIG RKQFVEMVR
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