| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3530 |
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| Symbol | |
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| ID | 4922863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4216330 |
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| End bp | 4218753 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165152 |
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| Product | glycerol-3-phosphate acyltransferase |
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| Protein accession | YP_001095655 |
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| Protein GI | 127514458 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.225343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC AAGACTCTCT TTGGTTTAAA TCCTTACGTT GGATCCAGAA GAAACTCGTG
CACACCATAG TAGTGCCTCA GGATCCCTTT GCCGATCTCA ACCTGGATTC AGACAGACCC
CTGGTCTATG TGATGAAGAC AGAATCGATC AGTGACATCG CCGCACTGAG CGAGGTAACC
GACCGACTCG GCCTGCCCAG CCCCTATCAG CCGCTGGATG TCGAGGGTGA ACAGGCACCG
CGAGTCGTCT GTGTCGAAGG AGCCAAGCCG CTATTAGGCG AACGCGAAGG CAACGAGTTT
TACCTCGAAA GCTTCTCGCG CCTGCTGAGT GCCCACAAGA AACATCCTGA GCTGGATATT
CAGCTGGTAC CCGTCAGCCT CTACTGGGGT CGCACCCCAG GCAAGGAAGA TGACAGCATG
AAGGCCGCGG TGCTGGAGCG TGAGAGCCCC ACCTGGCTAC GTAAGTGCCT GATGATCATC
TTCCTCGGCC GCCACAACTT TGTGCAATTT TCCAATGCCA TGTCACTGCG CTACATGGCC
GACGAGCACG GCACCGACAA GCGCATCGCC CAGAAGCTGG CGCGCGTGGC CAGGGTGCAC
TTCAGCCGTC AACGTAAGGT GATGACAGGC CCAGTACTGC CTAACCGCCA GAACCTGTTC
CACGCGCTGC TGAAATCTGA GTCGATGAAG AAGGCGATTC TGGAAGAGGC TCAGAGCAAG
AAGATCTCCG AGGCCAAGGC CCGCGAGACC GCCATGGAAT ACTTAGACGA GATCGCCGCC
GACTACTCAG ACAGCCTGGT GCGTATCGCC GAGCGTTTCC TCACTTGGCT GTGGAACAAG
CTCTACAAGG GGATCAACAT CAAGGGCGCC GAGCAGATCC GTCAGCTGCA CCACGACGGC
CACGAGATCG TCTACGTGCC TTGTCATCGT AGCCACATGG ACTACCTGCT GCTCTCATAT
ATCCTCTATT ACCAAGGCAT GGTACCGCCC CATATCGCCG CCGGTATTAA CCTCAACTTC
TGGCCCGCCG GCCCCATGTT CCGCCGCGGT GGCGCCTTCT TTATTCGTCG CAGTTTCCGC
GGCAATAAGC TTTATACCGC GGTATTCCGT GAGTACCTGG ATCAGCTGTT TGCCAAGGGC
TATTCGGTGG AGTACTTCAC CGAAGGTGGT CGCTCACGTA CCGGTCGCCT GCTGGCGCCT
AAGACGGGCA TGATCGCCAT GACGCTGAAC AGCGTGCTGC GCGGTGTCGA GCGTCCCGTC
ACCCTGGTCC CTGTCTATCT GGGCTACGAC CATGTGATGG AGGTAGCGAC CTATCACAAA
GAGCTGAGCG GTAAGAAGAA GCAGAAAGAA TCTGTGTGGC AGGTGTTTGG TGCCATACGT
AAGCTGGGCA ACTTCGGCCA GGGCTATGTT AACTTCGGTG AGCCTATTAC CCTGCATAGC
TACCTCAACG AGCAGGTGCC CGAGTGGCGC GAAGAGCTGG CCCAGGATCC CGAGCAGAAG
CCGAGCTGGC TGACCCCAGT GGTCAACACC CTGGCTAACC GCGTCATGAC CCGCATCAAC
GATGCCGCCG CCGTCAGCTC TATTACCCTG ACCAGTTTGG TATTGCTGGC CTCTGAGCAG
AATGCCCTGC AGCGCAGTCA GCTTGAGAAG CAGCTGGATC TCTACCTGTC GCTACTCAAG
AGCGTACCTT ACACGGGTTA CACCTCAGTG GTCGAAGGCG ACGGTGCCAA GCTGATCGCC
CAGGGGCTGG AGCTGAAGAA GCTCAAGCTG GACAGCGACC CCCTGGGTGA CATCATCTCC
ATCGATGAGA GCCTGGCGAT TGCCATGACC TACTATCGCA ATAACATCAT CCACCTGTTG
GTGATCCCAT CCTTGATCGC CAGCTGCCTG ACCCGCCAGG ATGAATGTAG CCGCGACGAG
ATCATCGCCA CGGTGAAAGA TTTCTACCCG CTGCTGCAGG CCGAGCTGTT CATGGGGATC
GATAACCTCG AGACCTATGT AAATCAGCTG CTGGATCAGC TACTGGCCGA AGGCTTAATC
GACGAAGACA AGCATTTCAG CGTCAAGCCA GATGGCCTCA ATCAGCTGTT ACTGCTGGCC
GGCACGATCA GCGAAACCAT GCAGCGCTAC GCCATCATCT TCAACCTGCT GGCGGCCTCG
CCTAAGATTG AGCGCTCAGA GCTCGAGAGC GACAGCCACC AGCTGGCCCA GCGTCTGGGC
GCGCTCCATG GCATCACTGC ACCAGAGTTC TATGACAAGA AACTCTACGG CACCCTGAGC
GTCAAGCTCA AGGAGCTGGG TTACCTGGCC GATGACAGCC ACAGTGAAGA TGTTCAGCGT
ATCCGCACCC GGGCCAACAG CCTGCTAAGG AGCTCGGTTA GACAGACCAT AGTCGACAGC
GTCGCTGCGG AGCATCAAGC CTAA
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| Protein sequence | MSKQDSLWFK SLRWIQKKLV HTIVVPQDPF ADLNLDSDRP LVYVMKTESI SDIAALSEVT
DRLGLPSPYQ PLDVEGEQAP RVVCVEGAKP LLGEREGNEF YLESFSRLLS AHKKHPELDI
QLVPVSLYWG RTPGKEDDSM KAAVLERESP TWLRKCLMII FLGRHNFVQF SNAMSLRYMA
DEHGTDKRIA QKLARVARVH FSRQRKVMTG PVLPNRQNLF HALLKSESMK KAILEEAQSK
KISEAKARET AMEYLDEIAA DYSDSLVRIA ERFLTWLWNK LYKGINIKGA EQIRQLHHDG
HEIVYVPCHR SHMDYLLLSY ILYYQGMVPP HIAAGINLNF WPAGPMFRRG GAFFIRRSFR
GNKLYTAVFR EYLDQLFAKG YSVEYFTEGG RSRTGRLLAP KTGMIAMTLN SVLRGVERPV
TLVPVYLGYD HVMEVATYHK ELSGKKKQKE SVWQVFGAIR KLGNFGQGYV NFGEPITLHS
YLNEQVPEWR EELAQDPEQK PSWLTPVVNT LANRVMTRIN DAAAVSSITL TSLVLLASEQ
NALQRSQLEK QLDLYLSLLK SVPYTGYTSV VEGDGAKLIA QGLELKKLKL DSDPLGDIIS
IDESLAIAMT YYRNNIIHLL VIPSLIASCL TRQDECSRDE IIATVKDFYP LLQAELFMGI
DNLETYVNQL LDQLLAEGLI DEDKHFSVKP DGLNQLLLLA GTISETMQRY AIIFNLLAAS
PKIERSELES DSHQLAQRLG ALHGITAPEF YDKKLYGTLS VKLKELGYLA DDSHSEDVQR
IRTRANSLLR SSVRQTIVDS VAAEHQA
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