| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3525 |
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| Symbol | fabG |
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| ID | 4922858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4212110 |
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| End bp | 4212835 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165147 |
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| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001095650 |
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| Protein GI | 127514453 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01831] 3-oxoacyl-(acyl-carrier-protein) reductase, putative |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.839377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAC GTGTATTGAT CACAGGTGCC AGTCGCGGCA TCGGCAAGGC CATCGCCCTT
AAGCTGGCCG AGACAGGCTA TGATATCGCC CTGCATTTCC ACAGCAATCA GGCGGCGGCC
GATGCAACCC AGACAGAGCT CGAGGCATTG GGGGCCAAGG TGAGCCGCCT CCAGTTCGAC
GTGGCCGACC GCGCCGGCGT CAAGGCGGCC ATAGAGGCCG ATATCTACCA GCACGGCGCC
TACTATGGCG TGGTGCTCAA CGCTGGGATC ACCCGGGACA CCGCCTTTCC AGCCATGAGT
GACGAAGAGT GGGATGGGGT GATCCACACC AACCTGGATG GCTTCTACAA CGTAATCCAC
CCCTGCACCA TGCCGATGAT CCAGTCTCGC CAGGGTGGTC GCATCATCAC CATGGCGTCT
GTCTCAGGCA TCGCGGGTAA CCGTGGCCAG GTCAACTACA GCGCCTCCAA GGCTGGCATC
ATAGGCGCCA CCAAGGCACT GAGCCTGGAG CTGGCCAAGC GTAAGATCAC TGTCAACTGC
ATCGCCCCCG GGCTGATAGA GACTGACATG GTGGAGTCGT TCCCCCAGGA GATGGTCAAG
GAGCTGGTAC CTATGCGCCG CATGGGCAAG GCCTCGGAGA TCGCCGGCCT GGCCAACTTC
CTCATGTCTG ATGACGCGGC CTACATCACC CGCCAGGTGA TCTCGGTAAA TGGTGGCATG
ATCTGA
|
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| Protein sequence | MNKRVLITGA SRGIGKAIAL KLAETGYDIA LHFHSNQAAA DATQTELEAL GAKVSRLQFD
VADRAGVKAA IEADIYQHGA YYGVVLNAGI TRDTAFPAMS DEEWDGVIHT NLDGFYNVIH
PCTMPMIQSR QGGRIITMAS VSGIAGNRGQ VNYSASKAGI IGATKALSLE LAKRKITVNC
IAPGLIETDM VESFPQEMVK ELVPMRRMGK ASEIAGLANF LMSDDAAYIT RQVISVNGGM
I
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