| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3523 |
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| Symbol | |
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| ID | 4922856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4210315 |
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| End bp | 4211520 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165145 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
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| Protein accession | YP_001095648 |
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| Protein GI | 127514451 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA TAGCTATCAC CCACCTAGGA TTATGCACCC CATTGGGGGA CGATCCCCAG
ACCGTCTTAC GCCGCCTACT CGATGGCGAT ACTCAGGGCA TGAGGTGGCG TGACGACCTG
ATCCCTGACA GCCAGGTATT GGTGGGAATG GTCACCACAG AGTTGCCGAG CATAGCACCC
GAATTACAAA GATTCGACTG TCGTAACAAT CAGTTACTCC AGCGCGCTGC CGAGCAGATC
GCCCCGGCGG TCGAGGCGGC CAAGACCCAA TACGGCGCAG ATCGCATAGG TATAGTGCTA
GGCACTAGCA CCTCAGGGAT CGCCAGGGGC GAGAAGGCAC TGGCCTACCG CGCCGAGCAT
GGTGTATTGC CCGCCGATTA CCTCTACTCC AAGCAGGAGC TAGGTAACAG CTGTGACTTT
CTGCAGCACT ATTTCGACCT CACGGGCCCC TGCTATACGG TATCGACCGC CTGCTCATCC
AGCGCCAAGG TATTCGCCAG CGCCAAGCGC CTGCTCCAGG CCGGCGTCTG CGACATGGTG
ATCGTCGGCG GCGCCGACAG CCTGTGTAAG CTGACCCTGA ACGGCTTCCA CTCGCTGGAA
TCTGTCTCCA AGGCCCATTG CCAACCCTTT AGCCGTAACC GCGACGGCAT CAATATCGGT
GAAGGCGCAG CCCTGTTTAC CCTAACCTTA GGCGAGGCCG AGCTGATGCT CGCGGGTGTG
GGGGAGTCCA GCGACGCCCA CCATATCTCT TCACCCCATC CAGAGGGCGA TGGCGCCGTG
GTCGCCATCG AGATGGCACT CAAGGATGCA GCCATCGCTC CGTCACAGGT GGGCTACATC
AACCTGCACG GCACGGCGAC CATAAAGAAT GATGCCATGG AGAGTCGGGC CCTGCTAAAG
GTGTTCGGCG AGCAACTACC ACCAGTGAGT TCTACTAAGC CGCTCACCGG TCATGCCTTG
GGCGCCGCCG GTGCATTGGA GGCGGCCTTC TGTCTGCTGA TCCTATCAGG TCCAAATAAA
GATCACGGGC TGCCACCCCA GGTGGGAGAC GGCCTGTGGG ATGATGACAA TCCGACGCTG
CCCTTCGTAT CACAGGGGCA CAGCACTCGG CCTGAGAATG CCAGGCTCGA ATATGTCATG
AGCAACTCCT TTGCCTTTGG CGGCAGCAAT GCCAGCGTCA TCTTCTGCCG GGGAGCCAAG
CAATAA
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| Protein sequence | MTQIAITHLG LCTPLGDDPQ TVLRRLLDGD TQGMRWRDDL IPDSQVLVGM VTTELPSIAP
ELQRFDCRNN QLLQRAAEQI APAVEAAKTQ YGADRIGIVL GTSTSGIARG EKALAYRAEH
GVLPADYLYS KQELGNSCDF LQHYFDLTGP CYTVSTACSS SAKVFASAKR LLQAGVCDMV
IVGGADSLCK LTLNGFHSLE SVSKAHCQPF SRNRDGINIG EGAALFTLTL GEAELMLAGV
GESSDAHHIS SPHPEGDGAV VAIEMALKDA AIAPSQVGYI NLHGTATIKN DAMESRALLK
VFGEQLPPVS STKPLTGHAL GAAGALEAAF CLLILSGPNK DHGLPPQVGD GLWDDDNPTL
PFVSQGHSTR PENARLEYVM SNSFAFGGSN ASVIFCRGAK Q
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