| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3518 |
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| Symbol | |
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| ID | 4922970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4204722 |
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| End bp | 4205156 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165140 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001095643 |
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| Protein GI | 127514446 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGCAC TGCTCACCAC AGAGATGGAG ATGGTCATCC CCTTCCACGA CGTCGACTCC
ATGGGGATCA CCTGGCACGG TAACTATCTC AGATATTTCG AGATCGCCCG CTGTCAGCTA
CTGGACGAAA TAGACTATGG CTACCGCAAG ATGCAGGCCT CAGGCTATGC CTGGCCCATT
ATCGATCTAC AGATTAAGTA TGTGCAGGCC AGCACCTTCG AGCAGAGGGT CAAAGTAATC
GCCAGCCTAG TAGAGTGGGA GAACCGTCTC AAGATCACCT ATCAGGTACG CGACGCCGAG
ACCAATCAGC GGCTGACCAA GGGTTACACC GTACAGGCGG CGGTCGAGAT GGAGAGCAAG
GAGCTCTGCC TGGTCACCCC TGACTGCTTC AGAGACAAGA TAGCCCACCT CCTTCCCAGC
GAGGCGCAGG CATGA
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| Protein sequence | MKALLTTEME MVIPFHDVDS MGITWHGNYL RYFEIARCQL LDEIDYGYRK MQASGYAWPI
IDLQIKYVQA STFEQRVKVI ASLVEWENRL KITYQVRDAE TNQRLTKGYT VQAAVEMESK
ELCLVTPDCF RDKIAHLLPS EAQA
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