Gene Shew_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3515 
Symbol 
ID4922967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4201059 
End bp4201430 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content59% 
IMG OID640165137 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 
Protein accessionYP_001095640 
Protein GI127514443 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT CAAACCTGCC ACCCATCATG GCCAAACGTT GCCTGGAAGA TGGCGTCGAA 
TGGCAGCTGC GCATCGATGC CGACCTGCCC TATTTCGAGG GGCATTTTCC CGAGCAGGCG
GTGCTTCCCG GCGTAACCCA ACTGGATTGG GCGGTACAGC TGGGCGCCAG CGAATTTGGC
TATGCGCCCC AGGTGAAGAG CCTAGAGGTG CTCAAGTTTC AACAGTTGAT CCTGCCCGGC
AGCGAGGTGC AACTGAAGAT CAGCCTCAAT CGCGCCAAAC ATAAGCTCAC CTTCGCCTAC
TATCAGGGCG AGCAGCGCTT CGGCTCGGGC CGCGTCTGCC TGACGCCACA CGACAACGAG
GAGAGAGGCT GA
 
Protein sequence
MIKSNLPPIM AKRCLEDGVE WQLRIDADLP YFEGHFPEQA VLPGVTQLDW AVQLGASEFG 
YAPQVKSLEV LKFQQLILPG SEVQLKISLN RAKHKLTFAY YQGEQRFGSG RVCLTPHDNE
ERG