| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3509 |
|---|
| Symbol | |
|---|
| ID | 4922961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4197123 |
|---|
| End bp | 4197857 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640165131 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095634 |
|---|
| Protein GI | 127514437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.243823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTTAC ACTTTCACAT TCATTCTGCG GGCGCCTGGT CTCCCCTATA CCAGTGCTTA
AGCGATTGGC AAACATGGCC AACGCCGCCG GCAGATGCCG AGCAGCTCGC TCTGGCCGCC
CCGGCGCTGA AGCAAGTGCC CGCCATGCAA AGGCGACGCT TTAGCAAGCT CACCAAGATG
CTGTTGGATG TCGCCTTTCA GTGCGATGCG CCCGCCCAAT GCCGTACTAT CTTCGCCTCT
CGCCACGGCG AGCTTAACCG CACAGTGGAT CTGCTGCAGG ACATAGTGCG CCAGCAGCCC
ATTTCGCCCA TAGGTTTCAG CCAATCGGTG CATAACACCG CCAGCGGCAT CTTCAGCATA
TTGACAGATA ACCGCGCGCC TTCGACCTCG ATCGCCGCCG GTGAGGCCAC CCTCATCCAG
GCCCTTGTCG AGGCCTATGG ACAACTGGCG GAAGATAACG CGCCGCTGCT GCTGGTGTTT
GGCGACGAGC CTGTGTCAGA TATCTACAAA GAATTTACCC AGGAACCCGA GCTGCCGCTC
GCCATCGCGC TGCAGTTGTC GCTATGCCAA GATCAGGTTT CAGGCACTCA GCTAGTCATT
GAGACCAAGC CAGATGCCAC CGAATTGGCG GCGGCGCAGC CGCTGAGCTT TGGCCAAGTG
ATCCACGCCA TCGCCAGCCA GCAACCGCTC GAGGGGCGCC TGAATCAATA CCTGGTGCGG
ATCTGTCATG ACTAG
|
|---|
| Protein sequence | MRLHFHIHSA GAWSPLYQCL SDWQTWPTPP ADAEQLALAA PALKQVPAMQ RRRFSKLTKM
LLDVAFQCDA PAQCRTIFAS RHGELNRTVD LLQDIVRQQP ISPIGFSQSV HNTASGIFSI
LTDNRAPSTS IAAGEATLIQ ALVEAYGQLA EDNAPLLLVF GDEPVSDIYK EFTQEPELPL
AIALQLSLCQ DQVSGTQLVI ETKPDATELA AAQPLSFGQV IHAIASQQPL EGRLNQYLVR
ICHD
|
|---|
| |